Silene latifolia (white campion): 141622448
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Entry
141622448 CDS
T11116
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141622448
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slaf01007
]
141622448
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141622448
Enzymes [BR:
slaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
141622448
Amino acid related enzymes [BR:
slaf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
141622448
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
141622448
Prokaryotic type
141622448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF2046
Motif
Other DBs
NCBI-GeneID:
141622448
NCBI-ProteinID:
XP_074294586
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All DBs
Position
X:5290900..5312408
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AA seq
974 aa
AA seq
DB search
MALLASHSFLTSYSFRRLHPFFLSQRRRFVVRVSPTSLRLSSPNYRRFSVSAMSQNDVFT
SPEVAKTFDFSSEEHIYSWWESQGYFKPNFERGGEPFVISMPPPNVTGSLHLGHAMFVTL
EDIMVRYHRMKGRPTLWIPGTDHAGIATQLVVEAMLASEGVKRVDLGREEFVNRVWEWKE
KYGGTITKQIKRLGASCDWNREHFTLDEQLSRAVVEAFVRLHEKGLIYQGSYMVNWSPNL
QTAVSDLEVEYSEEPGALYHIKYRVAGGSRDDFLTIATTRPETLFGDTAVAVHPEDPRYA
KYIGSQAIVPMTLGRHVPIISDRQVDREFGTGVLKISPGHDQNDYLLARKIGLPILNVMN
KDGTLNEVAGPLYSGLDRFEARKKLWAELQEMGLAVKKEPHTMRVPRSQRGGEIIEPLVS
KQWFITMEPLAEKALHAVKTGDLTIIPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWY
VVGRDPDEEYIVARSSDEALQIAQKKFGKDVEIYQDPDVLDTWFSSSLWPFSTLGWPDMS
EEDYKTFYPTTMLETGHDILFFWVARMVMMGIEFTGKVPFSHVYLHGLIRDSQGRKMSKT
LGNVINPVDTVKEFGTDALRFALALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLHSL
PSQSDHSAWETLSSYEFDNEEALLRLRLPECWVVSKLHLLIDLVTSSYDKYYFGDVARET
YDFFWGDFADWYIEASKARLYQSEDKPITFVAQAVLLYVFENILKILHPFMPFVTEALWQ
ALPNRKDPLIISPWPKTSLPMNANVIKRFENFQALTRAIRNVRAEYSVEPAKRISATIVA
NPEVLQYISEEKEVLAILSRLDLKGVHFTGSLPENANQSVHLVVSEGLEAYIPLADMVDI
SSEVQRLHKRLVKMEGEYKGLQARLSSPKFVEKAPDKVVCETREKAEEILEKINSTRNRI
AFLESTTAVVADRV
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgttactcgcctctcattccttcctcacttcctactcttttcgacgactccatcca
tttttcctctctcaacgtcgtcgttttgtcgttcgagtttctcctacttctcttcgttta
tcctctccaaattatcgccgtttctcagtttcggcaatgtcgcagaatgatgtgtttact
tcgccggaggttgcaaaaacctttgatttcagttcggaagagcacatttacagctggtgg
gaatctcagggttacttcaagccaaattttgagcggggtggagagccttttgtcatatct
atgccacctcctaatgtcactggatccttgcatctgggacatgctatgtttgttactctt
gaggatattatggtcagataccaccgcatgaaaggaagaccgacactttggattcctgga
actgaccatgctggtattgctacccagctagttgtagaagcaatgcttgcctcagaagga
gtaaagagagttgatttaggaagagaggagtttgtaaaccgtgtctgggagtggaaggaa
aaatatggcggaaccattacgaaacaaattaagaggcttggggcttcctgtgactggaat
agagagcatttcactcttgatgagcagctaagtcgagctgtagttgaggcgtttgtaaga
cttcatgagaaaggccttatttaccaaggttcatatatggtcaattggtctcctaatctt
cagactgctgtatcagatttggaagtagaatattccgaagaacctggtgcgctttatcat
atcaagtatcgcgtggctggtggttcaagggatgactttttgacaattgccacaacacgc
ccggagaccctttttggtgacacagctgttgcagtacatccggaggacccacgttatgca
aaatacataggctctcaggcgatcgttccaatgactttgggtcgtcatgtgccaatcata
tcagacaggcaagttgatcgggagtttggcactggcgtccttaagataagccctggacat
gatcagaatgactatcttctggctagaaagattggtcttccgatactgaacgttatgaac
aaagatgggactttgaacgaagttgctggaccactttactctggactcgatcgttttgag
gccagaaagaaactttgggcggagcttcaggagatgggattagctgtgaaaaaggaaccc
cacaccatgcgagtcccaagatctcaaagaggtggagaaataatagagccattagtaagc
aagcaatggtttataactatggagccgttggcagagaaagcccttcatgcggttaaaaca
ggagatttgactatcatccctgaaagatttgagaagatctacaatcactggctatcaaat
atcaaagattggtgcataagtagacaactatggtggggacaccgcataccagtttggtat
gttgtgggaagagaccctgacgaagaatatatagttgccaggagctccgatgaagccctt
caaatagctcagaagaagtttggaaaagatgtggaaatatatcaggatccagatgtgctt
gacacttggttttcgagttcattgtggcccttcagtacactgggatggcctgacatgtca
gaagaggattataaaacgttttatccaacaacaatgcttgaaacagggcatgatatactt
ttcttctgggttgctagaatggttatgatgggaatagaattcactggaaaagttcccttt
agccatgtatatctgcatggccttattcgcgactctcaagggagaaaaatgtctaaaaca
ttagggaatgtcattaatccagttgatacggtcaaggagtttgggactgatgctttgcgg
tttgcacttgccttgggaactgctggtcaggaccttaatttgtcaactgaaagattgact
tcaaacaaggctttcactaataagttgtggaatgctggcaagtttgtgctgcacagttta
cctagtcaaagtgaccattctgcgtgggagaccctctcttcatatgagtttgataatgaa
gaagcactgctcaggctgaggctaccagagtgttgggtggtttcaaaacttcatctcctt
atagacctagtgacatcaagttatgacaaatactactttggagatgttgctagagaaact
tatgatttcttctggggggactttgctgattggtacatcgaagctagtaaagctcgtctg
taccaatctgaggacaaacccataaccttcgtagcacaggcagtgctcttgtacgtcttt
gaaaacatactgaaaatattacacccgttcatgccatttgtcacggaagctctctggcaa
gcacttcctaatagaaaagatcctctgataatatcaccatggcctaaaacttcacttcca
atgaatgcaaatgtgattaaacgatttgagaatttccaagctctgaccagagctattcgt
aatgtccgagctgagtactcagttgagccagctaaacgtatttctgcaactatagttgca
aatccagaagttcttcagtacatatctgaagagaaagaagttctagctatcttatcccga
ctggatctgaaaggggtgcatttcacaggatcactcccagaaaatgcaaatcagtcggtc
caccttgtagtcagtgaaggtttggaggcgtatattcctcttgcggatatggtagatatc
tcttctgaagtacagcggcttcacaagcgccttgtgaagatggaaggggagtataaagga
cttcaagctcgccttagttctccaaagtttgtagagaaagctcctgataaagttgtctgt
gagacacgagaaaaggcagaagagatactagaaaaaatcaattcaacaagaaatcgtata
gctttccttgaatcaacaaccgcagtggtggctgacagagtatag
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