Silene latifolia (white campion): 141622470
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Entry
141622470 CDS
T11116
Name
(RefSeq) clustered mitochondria protein-like isoform X1
KO
K03255
protein TIF31
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
slaf03012
]
141622470
Translation factors [BR:
slaf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
141622470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
CLU_N
TPR_NPHP3
GSKIP_dom
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
141622470
NCBI-ProteinID:
XP_074294608
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All DBs
Position
X:complement(5561443..5576592)
Genome browser
AA seq
1391 aa
AA seq
DB search
MAGKTNKGKNRKGANSSNSNSNSNSNSDSNSNIDSTPLVVTSDSSEIVVDNTDSVVDVVA
GSDEPVVEANGVVAAAAAAEKAVSEEPPSDSVNNRQGELHLYPVSVKTFGGDKLELQLNP
GDSVMDVRQFLLDAPETCFFTCYDLLLHTKDGAVHSLEDYNEISEVADITTGDCSLEMVS
AYYDDRSVRFHVHRTRELLSVSNIHASLSTSLALEHERLRSTSETKQDSVKAVPEIEGFD
FMEDVTSCFSKLFPSSPKEIKCVESLVFSSLNPPPTHRRLVGDLIYLDVITLEGSNFCVS
GTTQGFYVNSTAGNCLDPKPAKSSFEATTLIGLMQKISPKFKKAFKEILEQKASAHPFEN
VQAFLPPNSWLAPYPPPGHRRDAARAENAITLTYGSELIGMQRDWNEELQSCREFPHTTP
QERILRNRALYKVTSDFVEAAMNGAVGVINKCIPPINPTDPECFHMYVHNNIFFSFAVDA
DLEQLPRKHKTNANVKNNITPVQHNSSGKIVDKISNAATDLGNGVESNGSRAEDESGVVI
EPSDASEVQFVDTEQATYASANNDLKGTKAYQEADVPGLYNLAMAIIDYRGHRVVAQSVL
PGILQGDKSDSLLYGSVDNGKKICWNEGFHCKVLEAANRLHLKEHSVSDEHGNVFKLAAP
VECKGIVGSDDRHYLLDLMRVTPRDSNYTGPRSRFCILRPELISAFCQKVEAAKRLSSKS
NCDEKDCLASEVSNGGVNADTDVQTVSCVPVTSDSQDISEEEGKATAKDSLSTTTETSDV
ISFNPNVFTEFKLAGSPEDIAADESSVKEASLYLTDVVLPTFIQDLCKLELSPMDGQTLT
EQLHTNGINVRYIGKVAEGTKHMPHLWDLFVNEIAVRSAKHLLKDVLRDTEEHEVGPAIS
HFFNCFFGDVQTVPEKTSSNVLQRRSHKKQAGNQKPTRGKNRSKNGAFARTNLSSYLGLC
SERLWSEIVEFAKFKYQFDLPEDLRTRVRKVSVIRNLCQKIGASLAARKYDLGAESPFQT
SDVVDLQPVVKHSVPVCSETKDLIDTGKAQLAEGRLSEAYTSFSEAFSTLQQVTGPMHRE
VANCCRYLAMVLYHAQDVGGAIMQQHKELIINERCLGLDHPDTAHSYGNMALFYHSLNET
ELALQHMSRALLLLSLSSGPDHPDVAATFINIAMMHQDAKNMGTALRYLQEALTKNKRLL
GEEHVQTAVCYHALAIAFNSMENYKLSHQHEKKTHEILLKQLGEDDLRTRDSHEWMNTFK
LRELQKKKNQALVNEARVDPDFWKEWQDALLAKGSGSSISLNSAQAAAAAVLKKKASSLK
GNSKRSSQSSQLSNATSKNEEQVDKNVNQPTGQTAEDSSNLAHHQRAENDAPLGLGKGLG
SLDSKRPPSKS
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaagactaataaaggaaagaatcgaaagggagcaaattcatccaattccaat
tccaattccaattccaattccgattccaattccaatatcgattctacgccgttggttgtt
acttcggattcttcggaaattgtcgttgacaataccgactctgtagttgatgttgttgct
ggtagtgatgaaccggttgttgaagcaaatggagtcgttgctgctgctgctgctgctgag
aaggcggtttcggaggagccgccttccgactcggttaataataggcaaggtgaacttcat
ctttatccggtttctgttaagacatttggtggtgacaagctcgagttgcagctgaaccct
ggtgattcggtgatggatgtgaggcagtttcttcttgatgcaccggagacgtgtttcttt
acttgttatgatttgttgttgcacacgaaagatggtgctgtccattctcttgaagattat
aatgagatttctgaagttgctgatattactaccggtgattgttcattggaaatggtttct
gcttattatgatgataggtcggtgcggtttcatgttcaccgtacacgggagttgctttct
gtttcaaacatccatgcttcactttcgacatctcttgctttggagcatgagagactacgt
agtacgtcagaaaccaaacaagattctgtcaaggcagttccggaaatagaaggttttgat
ttcatggaagacgttactagctgttttagtaaattgtttccttcttccccaaaagagata
aaatgtgttgagagcttagtattctcatcattaaaccctccccctactcatcgaaggctt
gttggggacttaatttatttggatgtgataacgctggaaggaagcaacttttgcgtatca
ggaacaacacaagggttttacgttaattcaaccgcaggaaattgtttagatcctaagcca
gccaaaagttcttttgaagcaacaactcttattggactcatgcaaaaaattagcccaaaa
tttaagaaagctttcaaggaaattttggagcagaaagcttctgctcacccatttgagaat
gttcaggcttttttgcctccaaattcatggcttgctccatatccaccacctggtcataga
cgtgatgcagccagggcggaaaatgccatcacccttacgtatggaagcgagctaattggc
atgcaaagggattggaatgaagaattgcagtcttgccgagagtttcctcatactactcct
caggaaaggattttacgtaatagagctctttataaagtaacttctgattttgttgaggct
gctatgaatggtgctgttggagttattaacaaatgcatacctccaatcaacccaacagac
cctgaatgttttcacatgtatgtgcacaacaatatattcttcagttttgctgttgatgcg
gacctcgagcagcttcctaggaagcacaaaacaaatgctaatgtgaaaaataacataaca
cccgtccagcataactcaagtggtaaaattgtggataaaatatctaatgcagcaactgac
cttggcaatggggttgaatcaaatggctcaagagcagaagatgagagtggagttgttatt
gaaccctctgatgcttctgaagttcagttcgttgatactgagcaagctacatacgcttct
gcaaataatgacttgaaaggcaccaaggcgtaccaggaagccgatgttccaggattgtat
aatcttgcaatggccattattgattataggggtcacagagtagttgcccagagtgttttg
cctggcatccttcaaggtgataaatcggactcccttttatatggttctgtggataatggc
aaaaagatttgctggaatgaaggttttcattgcaaggtattggaggctgcgaatcggctt
cacttgaaagagcacagtgtatctgatgagcacggaaatgtattcaaactagctgcacct
gtggaatgtaagggtattgtgggtagtgatgacaggcattatcttctggatttaatgaga
gtcactccacgtgattcaaattataccggtccgagatctcgcttttgtatattgaggcct
gagcttattagtgctttttgccaaaaggttgaagctgcaaaacggttaagttctaaatca
aattgtgatgaaaaagattgtttagcctctgaagtatcaaatggtggtgtaaatgcggat
acggatgtacaaactgtctcatgcgtaccagtaacttctgatagccaagatatttctgaa
gaagagggtaaagctactgctaaagattctttatctactaccactgaaacaagtgatgta
ataagtttcaatccaaatgtattcacggagtttaagttagctgggtcccctgaagatata
gcggcagatgaaagtagtgtgaaggaggcaagcttgtacctcacagatgttgtgctgcca
acattcatacaggatctatgcaaacttgaattatcaccaatggatggtcagacattaact
gaacaacttcatactaatgggattaatgtcagatatattggaaaagtagctgaagggaca
aaacatatgcctcatctttgggacctatttgttaacgagattgcagttaggtccgcaaag
cacttgctgaaggatgtcctgagagatacagaggaacatgaagttggtcccgctatatca
catttcttcaattgtttctttggagatgttcaaactgttccggaaaaaaccagcagcaac
gtcttgcagcgccgatctcacaagaagcaggcaggaaatcaaaagccaacgaggggaaaa
aacaggtcgaagaatggagcgtttgctagaacaaatttgtcttcctatttgggcttgtgc
tctgaaagattgtggtctgaaattgtggaattcgctaaattcaaatatcagtttgatttg
ccagaggatttaaggactcgggtcaggaaagtttcagtgattcgcaatctctgccagaag
attggcgcaagtctggcagctcgcaagtatgatcttggtgcggaatcacctttccaaaca
tcagatgtagtggatctgcaacctgtggtgaagcattcagttcctgtatgttcagaaacg
aaagatcttattgataccggaaaggcccagttggcggagggaagactaagtgaagcatat
acatcattttcagaggcattttctaccctgcagcaggtgactggcccaatgcatagagaa
gttgctaactgctgcaggtaccttgcaatggttctatatcatgctcaagatgtgggtgga
gccatcatgcagcaacacaaagagcttattatcaatgaacgctgtcttggtttggatcat
cctgatacagctcacagctatggcaacatggctctcttctatcacagtctcaacgaaacg
gagcttgcattacaacacatgtctagggcattgcttcttttgagcttgtcctcagggcct
gatcatcctgatgttgctgcaacttttattaatattgcaatgatgcatcaagatgctaag
aatatgggtacagctctgagataccttcaagaagctttaacgaagaataagaggcttctc
ggtgaggagcatgttcagactgccgtctgttatcatgcgttggctattgcttttaatagt
atggaaaactacaaactttctcatcagcatgaaaagaaaacgcatgaaatactcttgaaa
cagcttggcgaggacgacttgaggactcgtgactcacatgaatggatgaatacgtttaag
ctgcgtgagcttcagaaaaaaaagaatcaagctcttgttaacgaagctcgtgttgaccca
gatttctggaaggagtggcaggatgcccttttggctaaagggtcaggttctagtatttca
ttgaacagtgctcaagctgcagctgcagctgttcttaagaagaaagcttcttcattaaaa
ggtaactcgaaacggtcttcccaaagcagtcaactatcgaatgcgacctctaaaaatgag
gagcaagtggataagaatgtaaaccaaccaacgggccaaactgcagaagattcaagcaac
ttggcccatcatcagagagcagaaaacgacgcccctcttggtttaggtaaaggtttgggc
tcgttggattctaaaaggccaccgtcgaaatcttaa
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