Silene latifolia (white campion): 141622789
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Entry
141622789 CDS
T11116
Name
(RefSeq) beta-galactosidase 17-like
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00052
Galactose metabolism
slaf00511
Other glycan degradation
slaf00531
Glycosaminoglycan degradation
slaf00600
Sphingolipid metabolism
slaf00604
Glycosphingolipid biosynthesis - ganglio series
slaf01100
Metabolic pathways
slaf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
141622789
09103 Lipid metabolism
00600 Sphingolipid metabolism
141622789
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
141622789
00604 Glycosphingolipid biosynthesis - ganglio series
141622789
00511 Other glycan degradation
141622789
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
141622789
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaf04147
]
141622789
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
141622789
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141622789
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_gal-bd
BetaGal_ABD_1
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
141622789
NCBI-ProteinID:
XP_074294908
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All DBs
Position
X:9921565..9929377
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AA seq
680 aa
AA seq
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MATKKRVSFFSFTTIAAIFFYLFAFSAAVSPFRHHHHHHQAKHHNVRKFEIADDMFWKDG
EPFRIIGGDLHYFRVLPEYWEDRLMRMKALGLNTIQTYVPWNLHEPSPGNLVFNGIADIV
SFLKLCQKMGFLVMLRPGPYICGEWDLGGFPAWLLDKEPALRLRSSDPAYLHLVDSWWGI
LLPMLVPFLYENGGPIIMVQIENEYGSYGDDKAYLRHLVELGQRHMGHGVILYTTDGGTR
ETLEKGTIPEKGVYAAVDFTTGDKAWPIFELQKEFNAPGKSPPLSSEFYTGWLTHWGEKI
AKTDAYFTAAELEKILARNGSVVLYMAHGGTNFGFYNGANTGSSESDYKPDLTSYDYDAP
IRESGDVDNAKFRAIRRVIKKYAAAYVPPVPSNNEKAEYGYVELSKVSSLFDIITNQNNS
SIVESTDPISMESAGQTYGFLLYMSEYNAHNSASTLSIPKVHDRAQVFVTCNSKNYGGIP
IYAGNIERWSNKKLQLPHVKCASSIILFVLVENMGRINYGPYIFDRKGILSPVYLDDHPL
HNWKISPIPLHTLNGQRSLMIEVARSARAGVCADKSVLSKEPAFYSGSFTVNTTEDVKDT
FLSVEGWGKGVAFINKFNLGRYWPVYGPQCNLYVPAPLLHQGENTVELFELETVNPELTV
RFVQEENSVCGRTSSSVRDL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaagaagagagtaagcttcttttccttcaccactatcgctgccatcttcttc
tatctcttcgccttctccgccgccgtctctcctttccgccaccaccaccaccaccaccag
gcaaagcatcataatgttaggaagtttgagattgctgatgacatgttctggaaagatggt
gagccatttcggataattggtggtgatttgcattactttcgcgttctccctgagtattgg
gaagatcgactgatgagaatgaaggcattgggcttaaacactattcagacatatgttccg
tggaatctgcatgaaccaagccctgggaatctggtattcaatggcattgctgacatagtt
tcatttctaaaactctgccagaagatggggttccttgtcatgcttcggcctggcccgtac
atatgtggagagtgggatttgggtggatttccagcttggttgcttgataaagagccggct
ctcaggctgaggtcttcagacccagcttatctccatctggtggatagttggtggggcata
ctgcttcccatgctggtgccttttctctatgagaacggtggtcccatcatcatggttcag
atagaaaatgaatatggttcatacggagatgataaagcatatctacgtcaccttgttgag
ttaggccagagacacatgggacatggtgtaatcttgtacactacagacggcggtacgaga
gaaaccctggagaaaggaactatccctgaaaagggtgtctatgctgctgttgacttcaca
acaggtgacaaagcttggcccatatttgaactgcagaaggagttcaatgcccctggaaaa
tcacctcctctttcctcagaattctacactggctggctgacacactggggtgagaagatt
gcaaagactgatgcttattttacggcagctgagcttgagaagattttggcgaggaatggc
tctgtggttctttatatggcacatggtgggacaaattttgggttctataatggggcaaat
actggttctagcgagtcagattacaagcctgacctcacttcctatgattatgatgcacca
attagagagtctggtgatgtggataatgcaaagttcagagctatacgcagggtaataaaa
aaatatgcagcagcatatgttccacccgtcccatccaataatgagaaggcagagtatgga
tatgttgaattgtctaaagtttcatccctgtttgatatcattacaaaccaaaataactcc
agtattgtagaatccaccgacccaatttcgatggagtccgcgggccagacatatgggttt
ctactttacatgtcggaatataatgcacataacagtgctagtaccttatccatcccaaag
gtccatgacagagctcaggtttttgttacatgcaattcaaaaaactacggaggaatacca
atatatgcaggcaacattgagagatggtcaaacaaaaaacttcagcttcctcatgtcaaa
tgtgcttcgagtatcatcttatttgttttggtggagaacatggggaggatcaattatggc
ccatacatttttgacagaaagggcatcttatctccggtgtatctggatgatcaccctctt
cataattggaaaatttccccgattcctctccacactctcaatggtcaaaggagtctgatg
attgaggttgctaggagtgctcgagctggagtatgtgcagacaaaagtgtcctatctaaa
gaacctgctttctatagtggcagttttaccgttaacaccacagaagacgtaaaggacaca
tttctgtctgttgaaggctggggtaaaggggtagcttttatcaacaaatttaatctaggg
cgatattggccggtatatggcccacagtgtaacctctatgtccctgctccgcttcttcac
cagggcgaaaataccgtggaactctttgagctggaaactgtaaatcccgagctcacagtc
aggtttgttcaggaagagaactcagtgtgtggtcgtaccagttcaagtgttcgtgatctc
taa
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