Silene latifolia (white campion): 141622796
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Entry
141622796 CDS
T11116
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03082
ATP-dependent chromatin remodeling
slaf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141622796
03083 Polycomb repressive complex
141622796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slaf03036
]
141622796
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
141622796
Histone modification proteins
HAT complexes
HATB complex
141622796
HDAC complexes
Sin3A-HDAC complex
141622796
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
141622796
PRC2.2
141622796
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
141622796
Heterochromatin formation proteins
Other heterochromatin formation proteins
141622796
Chromatin remodeling factors
NuRD complex
141622796
NuRF complex
141622796
NuRF complex (fruit fly)
141622796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
eIF2A
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
ANAPC4_WD40
Frtz
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
141622796
NCBI-ProteinID:
XP_074294915
LinkDB
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Position
X:complement(9976753..9984677)
Genome browser
AA seq
472 aa
AA seq
DB search
MTEKGKGGKKALSVDEKYSQWKSLVPILYDWLANHNLVWPSLSCRWGPLIEEATYKNRQR
LYLSEQTDGSVPNTLVIANVEVVKPRVAAAEHISKFNEEARSPFVRKFKTIIHPGEVNRI
RELPQNSNIVATHTDSPDVYIWDLESQPNRPANLGTPASRPDLTLTGHQDNAEFALAMCS
SEPLVLSGGKDKSVVLWSIHDHISTLATEPGSAKSPNSGSNIKKAGNGNSDNPSIGPRGI
YLGHEDTVEDVQFCPSSAQQFCSVGDDSCLILWDARAGLTPVTKVEKAHNADLHCVDWNP
HDENLILTGSADSSINLFDRRNLTASGVGSPVHKFQGHDAPVLCVQWSPHNRSIFGSAAE
DGLLNIWDYEKVSKMETESGGKKSNHPAGLFFRHAGHRDKVVDFHWNSIDPWTLVSVSDD
CSSSAGGGTLQIWRIIDLLYRPEEEVLAELDKFRSHVAACSPTPTKDVNHSA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaaagggaaaggaggcaagaaagcattgagtgttgatgagaaatacagtcaa
tggaaatctcttgttcctattttatatgattggcttgctaatcataacctcgtttggcct
tctctctcttgcagatggggcccgttgattgaggaggcaacttacaagaaccgtcaacgt
ctttatctctcagaacagactgatgggagtgttcctaataccctcgtgattgccaatgtt
gaagtcgtgaaacccagggttgctgctgcagaacatatatcgaagttcaatgaagaggct
cgttctccctttgtgaggaagttcaaaacgataatacatcccggtgaggtaaacaggatt
agggagctcccccagaacagtaatatagttgcaactcataccgacagtccagatgtttat
atttgggatctggaaagccaacctaatcgtcctgctaatttgggaacacctgcctctcgt
ccagatttgactctgactggtcatcaagataatgctgaattcgctcttgcaatgtgctct
tctgaaccgctggtgctttctggaggaaaggataagtcagttgttttgtggagcatccat
gatcatatctcaacattggcaacagaaccagggtcagcaaaatctcccaacagtggcagc
aacataaagaaagctggtaatggaaattcagataatccttctattggacctcgaggcatc
tatctgggacatgaggatactgttgaagatgttcagttttgcccctcaagtgcacagcag
ttttgcagcgtgggtgacgactcctgtctcatactatgggatgcaagagctggattgacg
ccagtgactaaggttgagaaagctcacaatgctgatcttcactgtgttgattggaatcca
catgatgaaaacctcattctgactgggtcagcggatagttctattaatttgtttgaccgc
cgtaatcttactgctagtggagttggatcacctgttcataaatttcagggtcatgatgct
cctgtcctttgtgttcagtggtcaccgcataatagatcgatttttggcagcgctgctgaa
gatggcttgctaaacatatgggattatgaaaaggttagtaagatggaaacagagagcgga
ggtaaaaagtcaaaccatcctgcaggcttgtttttcagacatgctggacacagggacaaa
gtggtggacttccactggaattcgatagatccatggactctggttagtgtatcagatgac
tgttcaagctctgctggaggtggaacattgcagatatggcgcataatagacttgctgtac
agaccagaagaggaagttttggctgagctggacaagttcagatcccatgtagccgcttgc
tcgcctactcctaccaaagatgttaatcattctgcctga
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