KEGG   Silene latifolia (white campion): 141622828
Entry
141622828         CDS       T11116                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03030  DNA replication
slaf03410  Base excision repair
slaf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    141622828
   03410 Base excision repair
    141622828
   03420 Nucleotide excision repair
    141622828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slaf03032]
    141622828
   03400 DNA repair and recombination proteins [BR:slaf03400]
    141622828
Enzymes [BR:slaf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     141622828
DNA replication proteins [BR:slaf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    141622828
DNA repair and recombination proteins [BR:slaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      141622828
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE DNA_pol_B_exo2 zf_DPOE_2 RNase_H_2
Other DBs
NCBI-GeneID: 141622828
NCBI-ProteinID: XP_074294949
LinkDB
Position
X:complement(10669634..10691160)
AA seq 2220 aa
MNPFGGGRGRGGGGGGDFRRRRDDGRKKQQQQQLFRTAEDVLEAKLGFDIFTEGDKRLGW
LLTLSTSSVQDQETRNVYSCVDLYFVTQEGGYFKVKYKFRPYFYAATKDKMETDVEMYLK
RRYENDIAGIEILEKEDLDLKNHLSGLRKSYLKISFDTVQQLMNVRNDLLRVVERNRTKF
EAAQAYESIITGKSEQRVQDFVDCITDLREYDVPYHVRFCIDNDVRCGQWYDVSISTTGV
VLDRRLDLLQRAEVHVCAFDIETTKLPLRFPDAEYDSIMMISYMVDGQGYLIINREFVGD
DIEDLEYTPKPEFEGCFRVTNVKNEKELLRSWFSHMQEVKPGIYVTYNGDFFDWPFLERR
AAEHGYKMSDEIGFQCDKVQGECRARFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGY
DPMEVNPEDMVDFAKNKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLR
KGSGTLCEMLLMVQAFNANVICPNKHQSEPEKFHNSKLLESETYIGGHVECLESGVFRSD
LPTSFKLEPSAYQQLIDNLDRDLQYAIKVEGKMDLDIVSNYDEVKDAIRDKLTCLRDGPI
REEGPLIYHLDVAAMYPNIILTNRLQPPSIVTDEDCTACNFNRPGKVCLRKLEWVWRGET
YMAKKSDYYHLKRQIESESVESIDGQSSKSFLDLPKADQQLKLKDRLRKYCQKAYKRVLD
KPTTEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKSSGNPIKIQEAQ
NMVILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGR
PLELDTDGIWCALPGSFPENFTFKTKDSKRKLTISYPCVMLNVDVARNNTNDQYQTLKDP
VNKTYATHSECSIEFEVDGPYKAMILPASKAEGILIKKRYAVFNDDGTLAELKGFEIKRR
GELKLIKVFQAEMFDKFLDGSTLEECYAAVANVANRWLDLLDNQGKDVADSELLDYISES
STMSKSLVDYGEQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAIPV
AIFETENEIMKSYVRKWCKISSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVTNPV
PRVVHPDWLHKKVREKEDKFRQKKIKDLFSSKRDALEKDGAATSGSVNGGNNKHNINDME
DFGNLDGTGVGSRPVVQSYEVIGRDSNQTIHDQGRDGGVEFQNVVSVEEVDKTIDYAGWL
EQKKRKWKDNREKRKRQKLCDAKTSKHGPGVSSLRECVNNKKNIRRSGVSSYFKRQELSL
TSSYWQVLQLVPSDLPGQFFAWVVVEDSMLKIPISVPRVFYLNSRATEEFPGRRVNKILP
HGGRSYNLIEIIIDEMKFREESKRLMAHLADPEVEGIYETKVPPEFNAVLQIGCVCKVDK
GAKKRNAQAEWSVNELQMKTTAECHYLEMSLSFFYLYHSCCEGRAVYGGYFPASNMISFV
VVDPHQNKGLNPTNIKRFYHEACQALSIDPSISQGVISYKVDYVVENHEAERIMQRTISE
HRPQTNRPCLAVTECPSIHLLKTGIQVLNDLPCVSIPANARDSQYPAVGWQTVAAKIALQ
RCAASSQWLHERISLSRYAHVPLGNLDLDWIIYTIDIFFSRALRDNQQVLWISEDGVPDL
GGFNKDDSCFVDEVNQPVLVYPGAYRKVTVELKIHHLAVNALLKSSLINEIEGSGLYGFE
QDTDAEPHTSSDQYSFDETTSCGSAFRVLKQLVQRCLQDAITSGNVFADAILQHLYRWLC
SPQSKLHDPSLHTMLCKVMQKVFALLLAEFRKLGATIVFANFSKIILDTGKADLSAAKAY
CESLLKALQTRDMFEWIEIEPLHFWHSLLFMDQYNYGGIQAKDSDAASTSSSTFSSGELQ
VDIVSSWNIAEYLPKTTQDHFVVTVSEFMYKPWEYALNQTTNESFLDDGDLCTPSITAPV
AEKFEARLNEYLRDQISCYFSDKLFTIVREIVRHSKAVKIPQNDELSKVDPQLSGNVHTG
DSALEFIKHVCAVLALDQNVQHDVLVMRRNLLRYIRVKEFAPEAEFSLSHPSFVLPNMIC
SYCNDVRDLDLGRDPALLTEEWRCGVPQCGHPYDREKVENSLLQIARQRERLYHLQDLVC
VKCHMVKDRHLTEQCKCAGPFKCLEDPTEFRRKMLIFYKIAVQQNFQLLRDCVAWILEIR
NT seq 6663 nt   +upstreamnt  +downstreamnt
atgaatccattcggcggaggcagaggcagaggcggaggcggaggcggtgattttcgacgt
cgtcgagacgatggtagaaagaaacagcagcagcaacagttattccgaactgctgaagat
gtgttagaagctaaattagggtttgatattttcactgaaggcgataagcggctcggatgg
cttctcaccttatctacttcgtcggtgcaagatcaagagacgaggaatgtgtacagttgc
gtagatttatatttcgttactcaggaaggtggttattttaaggttaaatacaagttccgg
ccatatttttatgcggccacaaaagataaaatggaaactgatgtagaaatgtatttaaaa
agacggtacgagaatgacatagccggaattgaaatattagagaaggaagaccttgatctt
aaaaaccacttatctgggcttcggaagtcatacttgaagatatcatttgacactgtgcaa
cagttgatgaatgtaaggaatgacttgctacgtgttgttgaaagaaaccggacaaagttt
gaagcagctcaagcatatgagtctataatcacgggtaaaagtgagcaaagagttcaggat
tttgtagattgtataactgatctccgtgaatacgacgttccatatcatgttcgattttgt
attgataatgatgtaaggtgtggacaatggtacgatgttagtatttctactactggagtt
gtccttgataggagacttgatttgctacaacgtgcggaagttcatgtctgtgcatttgat
atagagacaacaaaacttcctttgagatttccagatgctgagtatgactcaataatgatg
atatcatatatggttgacgggcaaggatatttaattatcaaccgagagtttgttggggat
gatatagaggatttggagtacacaccgaaaccagagttcgaaggatgtttcagagttaca
aatgtgaaaaatgagaaagagctgctgagatcctggttttctcacatgcaagaagtaaaa
cctggtatatatgtgacatataatggagatttcttcgattggccatttttggagcggaga
gcagccgaacatggttataaaatgagtgatgagattggattccagtgtgacaaggttcaa
ggtgaatgccgtgcaagattttcttgccacctggattgctttgcctgggtaaagcgtgat
agttatctccctcagggtagtcagggcctgaaggctgttacaaaagccaaattaggttat
gatcccatggaggtgaatcctgaagacatggttgattttgcaaaaaataaacctcagatg
atggcctcatattcagtctctgatgctgttgcaacttattatttgtacatgacatatgtt
catcctttcatattttcccttgccactataataccgatgccgccagacgaggttttgcga
aaaggaagtgggactctatgtgagatgcttttgatggtccaggcctttaacgcaaatgtt
atctgtcctaacaaacatcaatccgagccggaaaagttccacaacagtaaacttttggag
agtgagacttacattggtggtcatgtggaatgccttgaaagtggtgtttttagatctgat
cttccaaccagtttcaagcttgaaccatctgcgtatcagcaactcattgacaatcttgat
cgtgacctgcaatatgcaattaaagtggagggcaagatggacttggatatagtctctaat
tatgatgaagtcaaggatgcaattagagataagcttacttgcttacgggatggacccata
cgggaagaagggcctctgatatatcatttggatgtggctgctatgtaccctaacattatc
ttgactaataggcttcagcccccgtctatagttacagatgaggactgcactgcatgcaat
tttaatcgtcctggaaaagtttgtcttcgtaaacttgaatgggtttggcgtggagaaacc
tacatggctaagaaaagtgactattatcatttgaagagacaaattgagtctgaatcagtg
gaaagtattgatgggcaatcctccaagtcgttccttgacttaccaaaggcagatcaacag
ttaaagctcaaagatcgtctacgcaaatactgtcaaaaggcatacaagcgggttcttgac
aagccaacaactgaggttcgtgaagcagggatatgcatgagggaaaactctttttatgtt
gatactgttcgcagctttcgagatagaaggtatgagtataaaggactcaacaaagtgtgg
aaagggaagttgtctgaagcaaaatcaagtgggaatccaataaagatccaggaggctcag
aatatggttatcctgtatgattctttgcaacttgctcataagtgtatcctcaattccttt
tacggatatgtcatgcgcaaaggtgcaaggtggtactctatggaaatggctggtgtggtc
acctacacaggggcaaaaatcattcagaatgctcgcttactggttgagaaaattggtaga
ccacttgaattagatacagatggaatctggtgtgccttacctggatctttccctgagaac
tttacctttaaaacaaaagactcaaagaggaagctgacaatttcttatccgtgtgttatg
ttgaatgtggacgtagctagaaataatacaaatgatcagtatcagacgctgaaagatccc
gtcaataaaacatatgcaacccatagtgaatgctcaatcgaatttgaagttgatggtcct
tacaaggcgatgattcttcctgcatccaaggcagaagggatactgatcaagaagaggtat
gcagttttcaacgatgatggaaccttggcagagctgaaaggttttgagattaagcgcaga
ggtgagcttaagctcatcaaggtgttccaggcggagatgtttgacaaatttctggatgga
tcaaccttggaagaatgctatgctgctgttgctaatgttgccaatcgctggcttgatctt
cttgataatcaagggaaagatgtagcagatagtgagctcctggattacatttctgaatca
agcaccatgagcaagtctttggtagactatggtgaacaaaaatcttgtgccgtaaccact
gctaagcgtcttgctgacttcctaggagataccatggtcaaagataaggggcttcgctgt
cagtatatagttgcatgtgagccaaagggcacaccagtaagtgagagagcaattccagtt
gcaatatttgaaactgaaaacgaaatcatgaaatcctacgtgcggaagtggtgcaagatc
tcatcagatgtcggcattagatccatcattgattggtcttattacaaacaacgtcttagt
tcggccattcagaagatcattactattccagctgcgatgcaaaaggtaacgaatcctgta
cccagggtggttcatcccgattggctacacaagaaggtgcgagaaaaagaggataaattt
cggcaaaagaagataaaggatttgttctcttctaaacgagatgctttagaaaaagatggt
gctgctacttctggctctgtgaacggtggaaacaataaacacaatatcaacgatatggag
gactttggaaacttggatggaactggagttggcagtagacctgttgtccaaagttacgaa
gttattggacgagattctaaccagacaatacatgaccaaggtcgtgacggtggtgtagaa
tttcagaatgttgtgtcagttgaggaagtagataagactattgattatgcaggatggctt
gagcaaaagaagcggaaatggaaagataaccgggagaagagaaaaagacaaaagttgtgc
gatgcaaaaacatcaaaacatggtcctggtgtttctagtctacgtgaatgtgtgaataat
aagaaaaatattcggagatctggggtcagttcatatttcaagaggcaggaattgtctctc
acaagcagctattggcaggttttgcagctggtcccaagtgatctgcctggtcaatttttt
gcatgggttgttgtggaggatagtatgcttaagattcccatcagtgttcctagagtcttc
tatctcaactccagagctactgaagaatttcctggaaggcgggttaacaagattctccct
catggaggtcgcagctataacttgattgagataatcatagacgagatgaagtttagagaa
gaaagcaagagactaatggcccatcttgcagatccagaagtagagggcatatatgaaacc
aaagttcctccagaatttaatgctgtcctccagataggctgtgtctgtaaagtggataaa
ggtgcaaaaaaaagaaatgcccaagctgagtggagtgtaaatgaactgcagatgaaaaca
acggctgaatgtcattatcttgagatgtccctctctttcttttacttgtaccacagctgt
tgtgaagggcgggcagtatacggagggtacttcccagcttctaatatgatttcttttgtt
gtggttgatccccatcaaaataaagggttgaatcctactaacatcaagagattttatcat
gaagcttgccaagctttgtccatagatccttctatttctcaaggtgtcatctcatacaag
gttgactatgttgttgagaatcatgaagctgaaaggattatgcagagaactattagcgaa
cacagaccacaaaccaaccgtccttgccttgctgttactgagtgcccgagtattcatctg
ctgaagaccggtattcaagttctgaatgacctaccttgcgtgagcatccctgccaatgcc
cgtgatagtcaatatccggctgttgggtggcaaactgttgctgcaaaaattgccctgcaa
agatgcgcagcatcatcccagtggctgcatgagaggatttctctttcaagatatgcacat
gtacctcttggaaaccttgaccttgactggattatatacactatagatatcttcttctct
agagctctgcgtgataatcagcaggtactctggatttctgaagatggtgttccagattta
ggtggctttaacaaagatgactcttgctttgttgatgaggtcaatcaacccgttctagtc
taccctggagcatatagaaaggtcacagtggagcttaagattcatcacttagctgttaat
gctcttctgaagagcagtctaatcaatgaaattgagggcagtggtttatatggatttgag
caagatacagatgcagagccacacacgtccagcgatcaatatagttttgatgagactact
tcctgtggatctgcattccgggttctgaaacagttggtccaaagatgcctgcaggatgca
attacatctggaaatgtttttgctgatgcaatactacaacatctttatcgatggctttgt
agcccacagtctaaacttcatgatccctcccttcacacaatgctttgcaaggtgatgcaa
aaggttttcgcattactgttggcagagttccgtaaattgggcgccacaattgttttcgca
aatttttcaaaaattattctggacactggaaaagcagacttatcagcggcaaaagcatac
tgtgagagcttgcttaaagcattacagactagggacatgtttgagtggattgagattgaa
ccactacacttttggcactccttgcttttcatggatcagtacaattatggaggcattcag
gccaaagattccgatgcagcatctaccagctcttcaactttctcttctggtgaacttcaa
gtggatattgtgtccagttggaatattgctgaatacctaccaaagacaactcaagaccat
tttgttgttacagtctctgagtttatgtataaaccgtgggagtatgccctgaatcaaact
acgaatgaatcatttcttgacgatggtgacctgtgcacaccatcgatcacagctcccgtt
gccgagaagttcgaggcacgtttgaatgaatatctcagagatcagatcagctgttatttc
tcagacaaactttttacaatcgtccgcgagatagtccgtcattcaaaagctgtgaagata
cctcaaaacgatgagttatcaaaagttgatcctcaactttctggaaatgttcatactggg
gacagcgcattggaatttatcaagcatgtctgtgctgttttggcattggaccaaaatgtt
cagcatgatgtcctggtcatgagaaggaatttgttacgatatatacgtgtcaaagagttt
gctcctgaagccgaatttagcctttctcatccgtcctttgtgttacccaacatgatttgc
agctactgcaatgatgtaagagacctcgacctggggagggacccagccctgctgacagag
gagtggcgatgtggagtgccacaatgtgggcatccttacgaccgagagaaggtagaaaac
tcgcttctccaaatagcaaggcagcgcgaacgcctttaccatttacaggatttggtatgc
gtcaagtgccatatggtcaaggatcgtcacctgaccgagcagtgtaaatgtgccggtcca
ttcaaatgtcttgaagatccgactgaattccgcaggaaaatgcttatattttataaaata
gctgtccaacaaaatttccaactcttgagagattgtgtagcttggattctggaaattagg
taa

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