Silene latifolia (white campion): 141622854
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Entry
141622854 CDS
T11116
Name
(RefSeq) GTPase LSG1-2-like
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141622854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141622854
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
Pre-60S particles
GTPases
141622854
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Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
141622854
NCBI-ProteinID:
XP_074294973
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Position
X:complement(11457107..11463584)
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AA seq
585 aa
AA seq
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MGKGEKTGLGRALVKQHNHMLQQNKEKGRFYKTHNNKVLTSVTEVSDIDAVLEQADEADR
AFTADNPVPNILLDDDSSSSTNALTPEDRRNLQKKEEALHAGSLRVPRRPPWNAGMTVDE
LDVNETQSFLSWRRGLAKLEENEKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDARDPL
FYRCPDLEVYVKEVDEHKRTMLLINKADLLPHAIRLKWAKYFNDNDILFLFWSAKAATAT
LEGKNLPSLDNEDTLQESEDIDTKVYGRDELLARLQFEAEEITRLRKSGPNVGNAGTNSA
SVTVGFVGYPNVGKSSTINALVGLKRAGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPS
FTSSRHEMIACGVLPIDRMTNQRDAVQVVADKVPRSVIEQVYKIGLPKPKPYEPQSRPPL
ASELLRAYCASRGYTASSGLPDETRAARQILKDYIDGKLTHYELPPGMSDDNTIESNEAL
LSSNLSDIDEYDSSDIEDSLSGNEIEIGSDLIEDVMKDLDSFDLANGLAAEKANPKKKPL
KASHKLHRKPQRKKDRSWRTGNDGGDGTPLPRVFQKPLNTGPLKT
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaggggaaaaaacagggttaggaagagccctagtaaagcaacataatcatatg
ctacaacaaaataaagaaaagggtcgtttttataaaactcataataataaagttttgact
tccgttactgaagtttctgatattgatgctgttcttgaacaagctgatgaagctgatcgt
gcttttactgctgataatcctgttcctaatatccttcttgatgatgactcaagctcaagc
accaatgccttgacacctgaagataggaggaacctgcaaaaaaaggaggaagcactacat
gctggcagccttcgcgtgcctcgaaggccgccgtggaatgctggaatgacagtagatgag
cttgatgtcaatgaaacgcagtcctttttatcgtggcgtagaggccttgccaagcttgag
gagaatgaaaagcttgttctcactccatttgaaaagaatttggatatatggaggcagctt
tggcgagtggttgaacgtagtgatctgcttgtaatggtcgttgatgcgagagaccctttg
ttctatcgttgccccgatctcgaggtgtatgtaaaagaggttgatgagcacaaaaggaca
atgttgcttatcaataaggcagaccttttaccgcatgcaatcaggttaaaatgggccaaa
tacttcaatgataatgacatcctgtttttattctggtcggctaaagctgccactgctact
cttgaggggaagaaccttccctcattggataatgaagacactttgcaagaatctgaggac
attgatacaaaggtttatggtagggatgagttgctggcccgcttacagtttgaagccgag
gagataacaaggttgaggaaatcagggccgaatgtcggaaatgcagggacaaattcagcc
agtgtaacagtgggatttgtcggttaccctaatgtcggaaagagctcaacaataaatgct
ttggttggtctgaaacgtgcaggtgtaacatctactccaggaaagaccaaacatttccaa
accctaataatatctgacaagcttactctatgtgattgccctggacttgtttttccgtcc
ttcaccagctcgagacatgagatgattgcttgtggggttttgccgattgatagaatgacc
aaccagagagatgctgtccaagttgttgccgataaagttccaaggtcggtaattgaacaa
gtttacaaaatcggtttgccaaaaccaaagccctatgaaccccaatcccgtcctccattg
gcatccgagcttctgagagcttattgtgcttctcgtggatatactgcctcgagtggacta
cccgacgagactcgggctgcccgtcaaattttgaaggattatattgatgggaagttgacc
cattatgagttgccacctggaatgtcggatgataacacgattgagagtaatgaagctctt
ctttcatccaacttgtccgatattgatgaatacgactcatctgacattgaagattcatta
tcgggtaatgaaatagaaattggatcagatctaatcgaggacgttatgaaagaccttgac
tcttttgatcttgccaatggactagctgcagagaaggccaacccaaagaaaaagcctctt
aaagcgtcccacaagcttcacagaaagccacagagaaagaaggatcggtcatggagaact
ggaaatgacggtggagatgggacgcctttgcctcgggtcttccagaagccattgaatacc
ggccctcttaaaacttaa
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