Silene latifolia (white campion): 141622867
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Entry
141622867 CDS
T11116
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141622867
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slaf01002
]
141622867
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141622867
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
141622867
Peptidases and inhibitors [BR:
slaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
141622867
Ubiquitin system [BR:
slaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
141622867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
141622867
NCBI-ProteinID:
XP_074294988
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All DBs
Position
X:complement(11629271..11642246)
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AA seq
1116 aa
AA seq
DB search
MTIMTPAPVDRQGDEEMLMPHSEIADDNQPMEVVAQAEPANAVENPPAEEPPTSRFTWKI
ENFTRLNTKKHYSEVFFVGDHKWRILIFPKGNNVDYLSMYLDVADSPSLPYGWSRYAQFS
LAVVNQVHNKYTVRKDTQHQFNARESDWGFTSFMALSELYDPGRGYLVNDTVIIEAEVAV
RKIVDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTEIDMPSAS
IPLALQSLFYKLQYSDGSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQKLFEGHHMNYIECVNVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVEKLDG
DNKYHAEQYGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDR
ENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSEQWYKFDDERVTKEDM
KRALDEQFGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKILCNVDEKDIAEH
LRERLNREQEEKEFKKKEKAEAHLYTIIKVARDEDLSEQIGRDIYFDLVDHDKVKSFRIQ
KQMPFNLFKEEVAKEFGIPVQLQRFWLWAKRQNHTFRPNRPLTALEEAQTVGQLREVSNK
VQNAELKLLLEVELDCDLRPIAPPEKTKDEILLFFKHYDPAKEELRYVGRLFVKANGKPG
EILGKLKEMAGYAAEEEIELFEEIKFEPTVMCEHIDLKLTFRGSQLEDGDIVCFQKTLPA
ETAGKYRYPVVPSFLDYVQNRQVVHFRSLERPKEDDFCLELSRHHTYDDVVERVSRQLGL
DDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLTDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHASKDEVVIHTRLPKNSTVGDVLNDLKTKVELSHPDAELRLLEVFYHKIYKI
FPPNEKIENINDQYWTLRAEEIPEEEKNLGPQDRLIHVYHFTKETAQNQTQIQNFGEPFF
LVIHEGETLADVKGRIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDTDIVSSRFQRRDVYG
AWEQYLGLEHPDTTPKRTLTANQNRHTFEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcatgactcccgctcctgtcgaccggcagggtgatgaagagatgctcatgccg
cattccgaaattgctgatgataatcaacctatggaagttgttgcgcaagcggaacctgca
aatgccgtggagaatccacctgcagaggaacctccaacgtcgaggtttacttggaaaatt
gagaatttcacccggctaaataccaagaagcattattctgaagttttctttgtcggtgat
cataaatggcggatacttattttccctaaagggaacaatgtggactatttgtcaatgtat
cttgatgttgctgattctcctagtttgccttatgggtggagtcggtatgcacagtttagc
ctggctgtggtgaatcaagttcataacaagtataccgtgagaaaagatacccaacatcaa
ttcaatgctagggaaagtgattggggctttacttcgtttatggctttaagtgagctttat
gaccccggtagagggtatcttgtgaacgatactgttattatcgaggctgaggttgctgtt
cgcaagatcgtagactattggtcctacgactcaaagaaggaaactggatttgttggactt
aagaatcaaggagcaacgtgctacatgaattctcttcttcaaacgctttttcacattcct
tattttcgaaaggctgtataccatatgcctacaactgaaattgatatgccatcagcaagc
attcctttggctcttcagagtttgttttacaagctgcaatatagtgacggcagtgttgca
acaaaagagttgaccaaatcttttggctgggatacttatgattctttcatgcagcatgat
gtgcaggagcttaatagggttctttgtgaaaagcttgaagataaaatgaagggtaccgtt
gttgagggtaccatccaaaaactgtttgaaggtcatcacatgaactacatcgaatgtgta
aatgtagattacaaatctactaggaaggagtccttctatgatctacagcttgacgttaaa
ggatgccgtgacgtgtatgcttctttcgataagtatgtggaagttgagaaactggacggt
gataacaagtatcatgctgagcaatatggtttgcaggacgctaggaagggtgtcttgttc
attgatttccccccggtgcttcaactgcagctcaaaagatttgaatatgattttatgcgt
gacaccatggtgaagatcaatgatcgctatgagtttcctctcgaacttgatcttgatcgt
gaaaatggcaaatatttatctcctgatgctgatagaagtgtacgcaacttgtatactctc
cacagtgttttggtccatagtggtggggtgcatggtggacactattatgcttatatacgg
ccaacactttcggaacagtggtataaatttgatgatgagcgagttacaaaagaagatatg
aaaagagctttggatgaacagtttggtggtgaagaggagttgccacaaacaaatcctggt
ttcaataaccctcccttcaaattcacaaaatattcaaatgcctatatgcttgtgtatata
cgtgaaagtgacaaggacaagattctgtgtaatgtggacgagaaggacattgctgaacat
cttagggagcgtttgaatagagaacaagaagaaaaggagtttaagaagaaagagaaggca
gaggcacacctgtacactatcataaaggttgcacgtgatgaagatctcagtgagcagatt
ggaagggatatttatttcgaccttgttgatcatgataaagttaaatcttttcgtatacag
aagcaaatgccatttaaccttttcaaggaagaggttgctaaagagtttggtatcccggta
caattacaacgattttggctgtgggcaaagcgccaaaatcacactttccggccgaataga
cctttgacggcattggaggaagcccagactgttggacagctgagggaagtgtcaaataag
gttcagaatgcagaactgaagttgctgttggaagtagagcttgactgtgatttacggccc
atcgcacctccagaaaagacgaaggatgaaattttactgttttttaagcattatgatcct
gcaaaagaagagctacgttatgtgggaagactttttgtcaaggctaatggtaaaccagga
gaaattttggggaaattgaaggaaatggctggctacgctgctgaggaggagattgagtta
tttgaggaaattaagtttgagccaactgtgatgtgtgaacatattgatctgaagcttacg
tttcggggtagtcagcttgaagacggagatatagtttgtttccagaaaactctaccagct
gaaactgcaggaaaataccgctatcctgttgtcccctcatttttagattatgtgcagaat
cgccaagtggttcacttcagatcactggagcgacccaaggaagatgacttttgcctggag
ttatcaagacatcatacatacgatgatgtagtggaaagagtgtctcgccaacttggcttg
gatgatccgtcaaaaattaggcttacttctcacaactgctactctcaacagccaaagcca
caacctattaaatataggggtgtggatcacttgacagacatgctggtccactacaatcag
acttccgacatactctactatgaagttttggacataccattaccagaattacaaggcttg
aagacactcaaagttgcttttcatcatgcttcaaaagatgaagttgttattcatactaga
ctaccaaaaaacagtacagtaggggatgttcttaatgacctgaaaacaaaggttgaatta
tcacatcctgatgctgagctgagattgcttgaagtattctatcataagatctataagatc
tttccaccaaatgaaaagattgagaatataaatgatcagtactggacattgcgagcagaa
gagattcccgaagaagagaagaacttgggtcctcaagatcggctaattcatgtgtaccac
tttactaaggagacagctcagaaccaaacgcaaatccaaaacttcggcgaaccctttttc
ttggtgattcatgaaggggaaaccttggctgatgttaaaggtaggattcaaaagaaattg
caggtgccagatgaagaattttcaaagtggaagtttgcatttttgtccttaggtcgtcca
gagtatctccaagacactgacatcgtgtccagtcgttttcagagaagagatgtatatggt
gcatgggaacagtaccttggattggagcatccagatactaccccaaaaagaacactcacg
gcgaatcagaatcgccatacttttgagaaacctgtaaaaatctacaactag
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