Silene latifolia (white campion): 141622957
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Entry
141622957 CDS
T11116
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
141622957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141622957
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141622957
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
U-box type E3
141622957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
Neurochondrin
zf-Nse
KAP
Arm_2
ARMC9_ARM
zf-C3HC4_4
MLKL_N
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
141622957
NCBI-ProteinID:
XP_074295094
LinkDB
All DBs
Position
X:13988006..13992266
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AA seq
656 aa
AA seq
DB search
MEEEKVCQELLLNNIISKINEISLITVFRPSVKKEYCNLARRLKLLIPMFEEIKEIDQQP
LSNDAVSSLVDFSHSLSLALDLLRFGSLGSKIYLALEREQVMAKFNEITSNLEHALDGIS
YQDLDISDEIKEQVELVITQFRRAKGRVDVLDAGLHEDLLSLHESNDATIDPTLLKRVSE
KLQLLKLDDLTQESVALTELIAPTGGDPDEKIEKMCNLLKKVKDFAQTENPNMGSSSKEK
NPSPGCSGLTLADGSPKSLAIPVDFRCPISLEIMKDPVIVSTGQTYERSCIEKWMNFGHN
TCPKTQQTLLNSSLTPNYVLRSLISQWCEANEIDPPKRPGLTPPGKDTSASSVTERSKIE
ELLHKLHSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVHLLSIPDSRTQEHAV
TALLNLSICDDNKGSIINSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGSS
GAITPLVMLLSEGNQRGKKDAATALFNLCIYQGNKGKAIRAGIVPILMRLLMEPGGGMLD
EALAILAILSSHPEGKAAIGSADALPVLVDVIGNGSPRNKENACAVLVHLSSGDNSYFVA
AQDLGVTGYLQEMAQNGTERGRRKAQQLLERINLYNELQALMPVMDEGHEPTVAEG
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaaaaagtgtgtcaagaattgttattaaacaatataatctcaaaaatcaat
gaaatttcactaattactgtatttcgtccttctgtgaagaaagaatactgtaatttagct
aggagattaaagttgttaatcccaatgtttgaagaaattaaggaaattgatcagcaacct
ttatcaaacgacgccgtttcatctcttgttgatttcagtcattctttatctcttgctctt
gatttgcttcgttttggctcccttggcagcaagatttacctggccctggagagggagcag
gttatggctaaattcaatgaaattacgtctaatttggagcatgctttggatggaatctca
taccaggatcttgatatctctgatgaaattaaggaacaggttgagctcgtgataacacaa
tttagaagagccaagggaagggttgatgtgcttgatgcgggactccatgaagatctgttg
tctctccatgagagcaatgatgcaactattgacccgactctattaaagagagtaagtgaa
aagctgcagcttctgaaacttgatgatctgacacaagagtctgtcgctctaaccgagttg
attgctccaactggtggagatcctgatgagaagatagagaaaatgtgtaatctattgaag
aaagttaaagactttgctcagactgaaaacccaaacatgggatcttcttcaaaagagaag
aatccttcacctggttgttctggactaacacttgctgatgggagtcccaagtctcttgct
ataccagttgacttccgctgcccaatttcattagagataatgaaagatccagttatcgtt
tctactgggcagacatatgaacgttcgtgcattgagaaatggatgaattttggtcataac
acttgcccaaagacacaacagaccctcctgaactcttctctcacgcccaactatgttctc
agaagtcttatatcccagtggtgtgaagcaaatgagatcgacccacccaagcgacctggc
ctgaccccacccggcaaagatacatcggcgagctctgtaactgaacgttcaaagattgag
gaactccttcacaagctccactccggcaaccctgaagaccaaagatcagccgccggcgaa
atccgacttcttgcaaagcgaaatgccgataaccgtgtcgcaatcgccgaggccggcgct
atcccgctactcgtgcaccttctttcaatccccgattcccggactcaagaacacgccgtg
actgcccttcttaatctctccatatgcgacgataacaaaggaagcatcatcaactcaggg
gctgtgccgggaatagtacacgtgttgaagaaaggtagcatggaggcgagagaaaacgca
gccgctacccttttcagcctatcggttgtggatgaaaataaggtgaccattggttcttcg
ggtgcaatcacacctcttgtaatgttactaagtgagggtaaccaaagaggaaagaaagat
gccgcgactgcccttttcaacctatgcatataccaaggaaataaaggcaaggctataaga
gccggaatagtgcctatattaatgaggctattaatggagccaggtggtgggatgttggat
gaggcattggcgattctagctatactgtcgagccatcctgaaggaaaagcagccatagga
tcggctgacgctttacctgttttggtggatgtgattgggaatggatctcccagaaacaaa
gagaatgcatgtgcagttttagtgcatctttcctcaggagataatagctactttgtagca
gcccaggatcttggagttacgggttatttgcaggaaatggcgcaaaacggcactgaacga
ggcagaagaaaagcccaacaattacttgagcggataaatctgtacaacgagctgcaggcc
ttgatgccagttatggatgaagggcatgagccaactgtggctgagggctga
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