Silene latifolia (white campion): 141623754
Help
Entry
141623754 CDS
T11116
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
141623754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141623754
Enzymes [BR:
slaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
141623754
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
141623754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
141623754
NCBI-ProteinID:
XP_074296011
LinkDB
All DBs
Position
X:188059037..188091648
Genome browser
AA seq
1131 aa
AA seq
DB search
MDMDKEFLSAPIKSPVDKYQLIPEFLKVGGLVKEHLDSYNYFVTTGINKIVQVNNEIRSS
QYPDLYLKFKDVKVGAPSIMSGGTEKSITPQFCRLSDFTYAAPIIAHIEYACRSQKLNKI
CEKHVVIGRMPVMLRSCCCILYRKDETELTKLGECPLDPGGYFVVKGKEKVILIQEQLSN
NRIIIDINKKGNFIASVTSSTTTFRSKTSIVMEKEKLYLDLNQFQTKVPILVVMKAMGME
SVQEVVQMIGRDPRYTSLLLPSIEECATCGVATRQQALEFLENKVKKPQYSGPLPEKENR
VLMILRDLFIAHVPVHKNSFRTKCIYAAVMLRRLLEAYLNKDAVDDKDYVGNKRYELSGQ
LLSLLFEDLFKTMITEVRKKVDVKLTRQYHSSKFDFSQNITTDIISAGLERAISTGNWHA
KRFGVDRKGVTQVLGRLSYIQALGFLTNIKSQYEKSRKVGGPRALQPSQWGMICPCDTPE
GESCGLIKNLALMTHVTTDDQENPLISLCYCLGVEKLELISPEQLHSSNSYLVIFNGIIL
GKHRRPQKFFIDLRQLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGVSRI
KEHHMQELADGVRTFDDFLRDGLIEFLDVNEENNALIALYEEDATAEATHFEIEPFTILG
VCAGLIPFSHHNQSPRNTYQCAMGKQAMGNIAFNQLFRMDTILYLLVYPQRPLLTTKTIE
LVKYDKLGAGQNATVAVMSYSGYDIDDAIVMNKSSLDRGFGRCIVMKKKSTILQRYDNGA
CERIVRPTREGYFAERMQALDDDGIASPGQIIRQNDFLVNKHTPLVTRGPLPPGRVPDRP
SAVRHGGFDGDTAVVDRAALFSDRNGNMWINLVLRQTRRPEVGDKFSSRHGQKGVCGAIV
QQEDFVFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPTGHA
DRVEVISETLVKHGFSYNGKDLLYSGITGTPLQAYIFMGPIYYQKLKHMVLDKMHARGFG
PRALLTRQPLEGKAKNGGLRIGEMERDCLIAYGASNLVHERLMMSSDPFTAQVCRKCGLL
GYYNHNLKAGICSACKNGEHISTMKLPYACKLLFQELQSMNIVPRLKLADA
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggatatggataaagaattcctctcggcacctataaaatcacctgttgacaaataccaa
ctcattcccgaatttttgaaggtgggagggttagtgaaagaacacttggattcttacaat
tatttcgtaactaccggcatcaacaagattgtacaagttaacaatgaaattcgatcatct
cagtatcctgatctttacctcaagtttaaagatgtcaaggtcggtgctccatcaattatg
tctggtggtacagagaagtccattacccctcagttctgcaggctctcagactttacatat
gcagcacccataatagctcatattgagtatgcatgtcgaagtcagaagctaaataaaatt
tgtgaaaaacatgtagtcataggaagaatgcctgtgatgctgcgaagctgttgctgcatt
ctttacaggaaggatgaaactgagctaaccaaacttggcgaatgtccacttgatccagga
gggtactttgtcgtaaaagggaaagaaaaggtaattttgattcaggagcaactttcaaat
aacagaataatcattgatattaataaaaaaggaaacttcattgcatctgttacaagcagt
acaacgacttttaggagcaaaacttcgatagtaatggaaaaggagaaactatatttggac
ctcaatcaatttcagacaaaggttcctatactagtagtgatgaaggctatgggaatggag
tccgttcaagaagttgtgcaaatgattggaagagatccacgttatacctctctacttttg
ccttctatagaggagtgtgcaacttgtggtgtagccacaagacaacaggctctagagttc
cttgagaataaggtgaaaaagccacaatattctggacctttgccggaaaaggaaaacaga
gtattgatgatcctccgtgacttattcattgcccatgtgccggttcacaaaaattcattt
cgcaccaaatgtatatatgctgctgtaatgttgaggcgcttgttagaggcttatctgaat
aaagatgcggtagacgacaaggattatgttggaaacaagcggtatgagctatctggccag
ttgttgtcactcctttttgaggacttattcaagacaatgatcacagaagttagaaaaaaa
gtggatgtaaaattaaccagacaatatcattctagcaaatttgatttctctcagaatata
accacggatataataagtgctggcttagaacgagcaatttcaactggcaactggcatgcc
aaaaggtttggggttgataggaaaggtgtgacacaggtgcttgggaggctttcttacata
caagccttaggcttcctcacaaatattaaatcacagtatgagaagtcgagaaaagttggt
ggaccgagagctttgcaacccagtcagtggggaatgatctgcccatgtgatacacctgaa
ggcgaatcgtgtggtttaataaaaaatttggcattgatgactcatgttactactgatgat
caggaaaacccattaatatctctgtgttattgcttgggcgtggagaaactcgagttaatc
tctcctgaacaactgcactcttcgaattcgtaccttgtaatatttaatgggattattctt
ggcaaacatagaaggccacagaaatttttcattgacttgaggcaattacggcgagctgga
aagattggcgagtttgtcagtgtctttgtgaatgaaaaacagcgatgtgtgtatattgca
tctgatgggggtcgtgtctgccgcccgcttgtaattgctgataaaggagtatcgaggatt
aaagaacatcatatgcaggagttggctgatggagttcgcacctttgacgatttcttgcgg
gatggtttaattgagtttctcgatgttaatgaagaaaacaatgccttgatcgctttgtat
gaggaagatgcaacagcagaagcaactcattttgaaattgaaccctttacaatattaggt
gtttgtgctggcttaattcctttctcacaccataatcagtcacctagaaatacatatcag
tgtgctatgggtaaacaagctatgggaaatattgcatttaatcagcttttccggatggac
acaatactctatctcttagtgtatcctcaacgacctttgctcactacgaaaactatcgaa
ctggtaaaatacgataagcttggtgccggtcagaatgcaactgttgctgtcatgagctac
agtggatacgatatagatgatgctatagttatgaacaagtcatcattggatcgaggtttt
ggacgttgtatagtaatgaaaaagaagagtacaattttgcagaggtatgataatggtgct
tgtgaaagaattgttagacctacaagagagggctattttgcagaaagaatgcaggcattg
gatgatgatggtattgcttctccaggacagatcattcggcaaaatgacttcttggtcaac
aaacacacaccattggttacaaggggacctcttcccccaggaagagtaccggataggcca
tctgctgttagacatgggggttttgatggagatactgcagttgtagatcgagcagcactt
ttctctgacagaaacggcaatatgtggattaacctggttctgcgtcaaactcgtcgaccg
gaggttggggacaagttcagcagcaggcatgggcagaaaggtgtatgtggtgccattgtc
cagcaggaggattttgttttttcagaacgtggtatttgccctgatttgattatgaaccct
cacggatttccgagtcggatgaccgtaggtaagatgatagagcttctcgggggtaaagct
ggagtttcatgtggccgatttcattatggaagtgcttttggggagccaactggtcatgct
gacagagttgaagtcataagtgagaccttagtgaagcatggattcagctacaatggaaaa
gatctcctttattcaggcataactggtaccccgctgcaagcatatatattcatgggccca
atttactaccagaaattaaaacatatggttctagataaaatgcacgcaagaggttttggt
cctcgtgccctcctaaccaggcaacctttggaaggaaaagctaaaaatggaggattaaga
attggtgaaatggaacgggattgtttgattgcttacggtgctagtaatttggtgcatgaa
cgcttgatgatgtcaagtgatccttttacagctcaggtttgtagaaaatgtggactgttg
ggatactacaaccacaacttgaaggctggtatatgtagtgcctgtaagaatggtgaacac
atatcgaccatgaaattgccatatgcatgcaagcttctttttcaggaacttcagtcgatg
aacattgttcctcgtctaaagctggctgatgcttaa
DBGET
integrated database retrieval system
