Silene latifolia (white campion): 141623970
Help
Entry
141623970 CDS
T11116
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY1-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141623970
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141623970
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141623970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_5
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
PHD_NSD
zf-ANAPC11
zf-RING_16
DUF2921
zf_RING_Vps8
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
141623970
NCBI-ProteinID:
XP_074296228
LinkDB
All DBs
Position
X:264694577..264706901
Genome browser
AA seq
561 aa
AA seq
DB search
MSTRRSDAMKLGFVFRGFLGLLLAFALLSQVSSLRPLKEQSRSWGDEWLFVKKEDNNIGP
FSSWNISGTYRGNWKFTESANISARFPDFKKSDGSSIVELMSTPTKITGVHYVQGVIIFH
DVFDNDREGGGAQIRVEGVYIWPFRQLRMVANSGKDGELGLEEDYFLSNPYHLLGVFSSQ
VFQESPRIWRKKKSQVQDIEKHCNIEIAAQVSRIPSLQSDGEHDRYHLEGLMESPSADED
GDCFSPLLLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIL
MVGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPAN
SGEGWEAMRRELSVLYSRFYGILLGGILVMYEFHSYLRPILLLMYSFWIPQIVTNIIRDS
RKPLHPHYILGMTITRLAIPLYVFGCPNNFMRIQPDKTWCVCLCTFMGFQSLVLLVQHYF
GSRCFIPRQILPEKYSYYRRFDQDSNRTTDCVICMAAIDLSQRSSDCMVTPCDHFFHSGC
LQRWMDIKMECPTCRRSLPPA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgaggagaagtgatgcaatgaaattggggtttgtgtttagaggttttctgggt
ttgttgcttgctttcgctcttttgtctcaggtgtcgagtttgaggccgttgaaggaacaa
tcaaggtcttggggagacgagtggctctttgtcaaaaaggaagacaataacatcggtcct
ttctctagctggaacataagtggaacttacagaggtaattggaagtttactgagtctgca
aatatctctgctagattccctgatttcaagaaatctgatggaagctccattgttgagttg
atgagtacccctactaaaataactggagtacattatgttcagggagtaattatattccat
gatgtgttcgataatgaccgtgaaggtggtggcgcccaaattcgagtggaaggtgtatat
atatggccatttaggcaactaagaatggtggccaacagtggaaaggatggtgaattaggt
ctagaagaagactacttcttatctaatccatatcacttgcttggagttttctcatcacaa
gtttttcaggagtcccccaggatatggagaaaaaagaaatcccaagtgcaggatatagaa
aagcattgtaatatagaaattgctgctcaagtttcacggattccatccttgcagagtgat
ggtgagcatgatcgataccacttagaggggttaatggaatctccatctgctgatgaagat
ggagactgtttttctccgttgttgcttaatgctacctctgtcaacattgaagtctactac
aataaggctgtcaattatacgctgatggttacctttgtttccttccttcaagttcttttg
ttgattcgacaaatggagcatagcaatacacaatctggagctgccaaggtttctatattg
atggttgggcagcaggctattatggatgcatatctgtgccttctacatttgacagctgga
atacttgttgaatccttgtttaatgcttttgcaaccgccgccttcttcaagtttgtcgtc
ttttcaatatttgagatgagatatctcttggctatatggaaagcaagtaggcctgctaat
agtggtgaaggttgggaggccatgagacgtgaactttcagttctctatagcagattctat
ggcatcctgttgggaggcattctggttatgtacgagtttcatagttatcttcgacctatt
cttcttcttatgtactccttttggatacctcaaatagttaccaatattatccgtgattca
agaaagccattgcaccctcattacatcttagggatgactatcactcgactagcaatacca
ttatatgtctttggttgccccaacaactttatgcgcattcagccagacaaaacatggtgt
gtatgtttgtgtactttcatgggattccaatcgctggttcttcttgttcagcactacttc
gggtcgcgttgctttataccacgtcagatcctacccgagaagtacagttactatagacgg
ttcgatcaagattcaaaccgtacaacagactgtgtcatttgcatggctgccattgatctc
tctcaacggtctagcgattgcatggtgactccttgtgatcatttcttccactccggttgc
ttacaacgatggatggacataaaaatggaatgtccaacatgtcgccgatcattgccacct
gcttga
DBGET
integrated database retrieval system
