Silene latifolia (white campion): 141627179
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Entry
141627179 CDS
T11116
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141627179
03012 Translation factors [BR:
slaf03012
]
141627179
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
141627179
Translation factors [BR:
slaf03012
]
Eukaryotic type
Initiation factors
eIF-3
141627179
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
RRM_1
ANAPC4_WD40
Beta-prop_ELP1_1st
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
141627179
NCBI-ProteinID:
XP_074296699
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All DBs
Position
Y:complement(40602852..40608796)
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AA seq
709 aa
AA seq
DB search
MAIDFDERAAALGIDLSQVNWDSIKLPPGEDFGIKSDDEDLREEEVEFEQGFGNIVVVDN
LPQVLPEKFDKLEAVIRKIYSQMGVIKENGFWMPVDEKTGKSLGYCFIEFNTPQEAELAK
EKTHGYRLDKAHLFAVNLFEDIEKYMKVPDEWAALEMQPYKPTENLQRWLTDAKARDQFV
IRAGQDTEVLWNDARQLKPDLVHKRSFWTDSYVQWSPLGTYLATIHRQGAAVWGGASTFD
RLMRYIHPQVKLIDFSPGEKFIVTYSSHEPSNPRDTHRVGLNIFDTRTGKVKRDFKGSAD
EFAVGGAGGLTGISWPIFKWAGGRDDKYFARIGKNVVSVYETETFTLIDKKSIKVENVMD
FSWSPTDSILALFVPELGNQPAKVSLYQIPSKVEIRQKNLFSVSDCKMYWQSNGEYLAVK
VDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNPR
PDVSFYSMKMTHHTSRVSKLTTLKTKQANALYWSPGGRYIILAGLKGFNGQLEFFNVDEL
ETMGTAEHFMCTDIEWDSTGRYVATVVTSVHEMENGFNIWSFNGKLLYRIMKDHFFQFQW
RPRPPTLLSPEKEEEIAKNIKKYSKKYEAEDQDVSLLLSEQDREKRRLLKEEWESWLHQW
NQNHEAERLERERLRGGEASEEEEEYEAKEIEYEEVIDVKEVVSFDYDQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgattttgatgaaagggcagctgccctcggcattgatctatcccaggttaat
tgggattcaatcaaattaccaccaggagaggatttcggcattaaaagcgatgatgaggat
cttagggaagaagaagttgaattcgaacaggggtttgggaacattgttgttgttgataat
ttaccccaagttttgcctgagaagtttgataaacttgaggctgttattcgtaagatttac
agtcaaatgggtgttatcaaagagaacggattctggatgccagttgatgagaaaactggc
aaatcacttggttattgttttattgaatttaatactcctcaggaagctgaacttgcaaag
gaaaagacgcatggatacaggctcgacaaggcccatttatttgctgtgaatttgttcgaa
gatatcgagaagtatatgaaagttcctgatgagtgggcggcgctagaaatgcagccatac
aaaccaactgaaaatttgcaacgttggcttaccgatgccaaggctcgggatcagtttgtt
atccgtgcggggcaagacacggaggttttgtggaacgatgccaggcagttgaagcctgat
cttgttcacaaacgttctttttggaccgacagctacgtgcagtggtcccctttgggcact
tacttggctacaatccaccgtcaaggtgctgctgtttggggtggggcctcaacctttgac
cgtttaatgcgttatattcatccacaggttaagctaattgacttttctcctggagagaag
tttattgttacttacagcagccatgaaccaagcaatcctcgagatacccatagggttggg
ctcaatatctttgatacaaggactggaaaggtgaagcgagattttaaaggaagtgctgac
gagtttgcagtaggaggggcaggtggtttgactgggatcagttggcccattttcaaatgg
gctggtggaagggatgataaatattttgctagaattgggaaaaatgtcgtctcggtgtat
gaaacagaaacctttactctcattgacaagaagtccataaaggtggaaaatgttatggac
ttcagttggtctcccactgattcgattttggcactttttgttcctgagcttggtaaccaa
ccggcaaaggtgagtctttatcagatccctagcaaagtggagatacgccaaaaaaatctt
ttcagtgtcagtgattgcaaaatgtattggcaaagcaacggagagtatcttgctgttaaa
gtcgatagatacaccaaaacaaagaaaagcacatacactggatttgagcttttccggatc
aaggaacgtgacatacctattgaagttttggaacttgaaaataaaaatgacaaaatcatt
gcttttgcttgggaacccaagggccaccgatttgcagttatccatggtgataaccctagg
cccgacgtaagcttctactcaatgaagatgactcaccatacaagcagagtctctaagctc
acgactctcaaaacaaagcaagctaatgctctttattggtcacccggtggtcgttatata
atattagctggattgaagggtttcaatgggcagttggaatttttcaatgttgatgagctt
gaaacaatgggtacggctgagcatttcatgtgtactgacattgaatgggattcaactggg
agatatgttgcgactgttgtcacttcggtccacgagatggagaatggcttcaacatttgg
tctttcaacgggaagctgctgtacagaataatgaaggatcatttcttccagtttcaatgg
cgcccaaggcccccaaccttgttaagccctgaaaaggaagaggaaatagcaaagaacata
aagaagtacagtaagaagtacgaagctgaggaccaggatgtatccttgttgttgagcgag
caagaccgcgagaagaggcgactgttgaaggaagaatgggaatcctggcttcaccaatgg
aaccaaaaccacgaagctgagaggttggagagggagagactgagaggcggtgaagccagt
gaggaggaggaggaatatgaggcaaaggaaatagagtatgaggaggtcattgatgtcaaa
gaagttgtttccttcgactacgatcaataa
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