Silene latifolia (white campion): 141628080
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Entry
141628080 CDS
T11116
Name
(RefSeq) mRNA export factor GLE1-like
KO
K18723
nucleoporin GLE1
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03013
Nucleocytoplasmic transport
slaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141628080
03015 mRNA surveillance pathway
141628080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141628080
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141628080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
141628080
NCBI-ProteinID:
XP_074297369
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Position
2:6943578..6946267
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AA seq
435 aa
AA seq
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MAEIAFLEMTYQHNLRVTEELRNQVNSLTAELIAEKEKYTSAILREVKAIEAIREYEVKL
DIHYQRKIAETLDNHLIVIRKDYEEKFRQLKMKEEDVARRESAIIAEEMKKAAAEAERAK
NAAAETERAKEAAAEAERAREAAAEIERAKKAAAEAERVKEAAAEAERAKEAENALMFDE
ELLRGIARLIRQISGSVENVRSKTREISRMLNNSDVPQSVTIAIFAKKVISLYETRKSDS
DVFACGRVIVNVSGQVPAVMSSVLAEFHKECMYTVPNHITYSKAAFETEQKYFKAIGFRE
KNGKLETMDEYLERLESWMKLYGAFIQTEGHGLEYGWTWLARFLNTLPVNVFTASALTAF
LEMAGFALHEKYKDQFRKVLTAISKEFVQKLKASRNQRINPVVMRLEDYIKSNKFLVEPE
GMRLRISLSSNNAYL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaattgcgtttctggagatgacatatcagcacaatcttagggttacagaagaa
ttaaggaatcaagtaaactcattaacggcagagttgatcgccgaaaaggagaaatatacc
tcggctattctacgagaggtgaaagcaattgaagcgatccgagaatacgaagtaaagctc
gacattcattatcagcgtaagatagcggaaactcttgataatcatttgattgtcatccga
aaggattatgaagagaaattccgtcaactgaaaatgaaagaagaagatgtggcaagacgt
gaatctgcaataatagcagaagaaatgaaaaaagctgcagcggaagcagaaagagctaaa
aatgctgcagcggaaacagaaagagctaaagaagctgcagcggaagcagaaagagctaga
gaagctgcagcggaaatagaaagagctaaaaaagctgcagcggaagcagaaagagttaaa
gaagctgcagcggaagcagaaagagctaaagaagcggaaaacgctctgatgtttgatgag
gagttgttgcggggaattgctcggctaattagacaaataagcggatcagtagaaaacgta
aggtctaaaacaagggaaatttcgagaatgttgaataacagtgatgttcctcaatctgtc
acgatagcaattttcgcgaagaaggttatttctctatatgagacgagaaaatcagactct
gatgtcttcgcgtgtggccgtgtgatagttaatgttagtggacaggtgccggctgtgatg
agctcggttctggccgagtttcataaagaatgtatgtatactgttccgaatcatataacc
tactcaaaggcggcctttgaaacagaacaaaaatatttcaaagcgattggctttcgggaa
aaaaatgggaaattggaaacaatggacgagtatttggaacgtttggaatcgtggatgaaa
ctatacggggccttcattcagacggaaggtcatggtttggaatacggttggacttggctt
gcgcggtttttgaatacgttgcctgttaatgtattcacggcctccgccctcacggctttc
ctggaaatggcaggattcgcacttcatgagaaatataaggatcaattccggaaggtatta
accgcgatatcaaaggagtttgtgcagaaactaaaggcgagtcgaaaccaacgaattaat
ccggttgtgatgaggcttgaagattatatcaaatcaaataaattccttgtagaaccagaa
ggaatgcgccttagaatctctttgtcatcaaataatgcttatttgtaa
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