Silene latifolia (white campion): 141628684
Help
Entry
141628684 CDS
T11116
Name
(RefSeq) DNA topoisomerase 1 alpha-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slaf03032
]
141628684
Enzymes [BR:
slaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
141628684
DNA replication proteins [BR:
slaf03032
]
Eukaryotic type
DNA Topoisomerases
141628684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
RodZ_C
DUF4094
Motif
Other DBs
NCBI-GeneID:
141628684
NCBI-ProteinID:
XP_074297895
LinkDB
All DBs
Position
2:complement(21257340..21261588)
Genome browser
AA seq
706 aa
AA seq
DB search
MAVEVNLPPKVVETNVSNNNNNNACDSDDDEKPLSSRLLRPNRVSKASSGERLGDVLDSD
DDEKPLSLRVRMPLNSTLYSSKSETNSSDDEAPLSLRVGQKSVDAPRIMPLDEGKKTKKR
AAPEGCSRQSRAKKLKITKNNSKKTKNLQYAVSMKTPPDKGKGKEWSSLEHNGVLFPPPY
IPHGVKMLYDGQPVDLTPEQEEVASMYASKLETDHARNPVFNRNFFNDWRKILGEKHVIK
EFERCDFKPIHEWLTRVAINAKEERKNMSKEEKAALDKQKSEKLDKYKWAIVDGVREQVG
NFRVEQPELFKGRGDCPKTGKLKKRILPSDITINIGKDAPIPECPIPGERWKEVIHEDTV
TWLARWDDPVKPNQCKYVFLAASSRLKGKNDMEKYQKARELKNHINKIRKSYTKDFKSKD
VTIKQTAVATYFIDKLALRAGNEKDDDEADTLGCCTLKVENVKQIPPNILEFDFLGKDSI
RFYQKFEAEPLVFKAIEQLRKGKQPQDQLFDKLDTHKLNTHLKTFMPDLTAKVFRTYHAS
MTLNNLLWEEVDSDDVKQKLEIYKNANKQVAILCNHQRSIPKSHNTSMEKTTEKIRQLKT
ALSELQKDLDQANIGKQSIKKRKFCTEALENKIVKQKEKIRRMEMEMESKEDLKTIALNT
SKTNYLDPRITVSWCKRNEVPIEKIFSKTYMAKFIWAMDVEPTFRF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgaagttaatttgcctcctaaagttgttgaaaccaatgtttcaaacaacaac
aacaacaatgcatgtgattcggacgatgatgagaagcccttgtcatcgaggttattgcgc
cccaaccgggtttcgaaagcaagctcgggtgagcgtcttggagatgtattagactcagac
gacgatgaaaagcccttgtctttaagggtaagaatgcccttaaattcaacgttatattcc
tccaagtctgagaccaattcttcagacgacgaggcgcctttatcgttaagggttgggcaa
aaatctgttgacgcgccaaggataatgcccttggatgaaggcaaaaagaccaagaaaagg
gctgctcctgaggggtgttctcgtcagagtcgtgctaaaaaattgaagattacgaagaac
aattcaaagaaaacgaagaacttgcaatatgcggtgtctatgaaaacgccgcctgataaa
gggaaagggaaggaatggagtagtttggagcataatggtgttttgttcccacccccttat
attccacatggggtaaagatgttgtatgatgggcagcctgttgatctcacaccggaacaa
gaagaggttgcatcaatgtatgccagcaagctggagacggatcatgcaaggaatccggtg
ttcaatagaaatttctttaatgattggaggaaaattcttggagagaaacatgtaattaag
gaatttgagagatgtgatttcaagccgatacacgaatggttaactcgagtcgctattaat
gccaaggaagagaggaaaaacatgagtaaagaggaaaaggctgctttagacaaacaaaaa
tcagagaaattagacaagtataaatgggctattgttgacggagtaagagaacaggttggt
aacttcagagttgagcaaccagaactgtttaaaggtcgcggtgactgcccaaagacaggg
aaactgaagaagcgcatcttaccaagcgacattaccataaacattgggaaggatgctccg
attccagagtgtcctattcctggtgaaaggtggaaagaagtaatccatgaggacactgta
acatggttagctcggtgggatgatcctgtgaaaccaaatcagtgcaaatacgtgtttttg
gcagccagcagccgcttgaagggaaagaatgacatggagaaatatcagaaagctcgggag
ttgaagaatcatataaacaaaatcaggaaatcctacacaaaagatttcaaaagcaaagat
gtgactatcaagcaaactgctgtagcaacctattttattgataaactggctcttagagct
ggtaatgaaaaggatgatgatgaggcggatacccttggctgctgtacactgaaagtagag
aatgtgaaacagataccacctaacatattggagttcgacttccttggtaaagattcgatt
aggttctaccaaaagttcgaagctgaacccctcgtgttcaaggctattgaacagttgcgg
aaagggaaacaacctcaagatcaactgtttgataagctagatacacataaactgaatacg
catttgaagactttcatgcctgacctcacagccaaagtctttcgcacttatcatgcttca
atgacgctcaataatttgttgtgggaggaagttgacagcgatgatgtgaaacagaagctt
gaaatatacaagaacgcgaataaacaggttgccattctttgtaatcaccagcgtagtata
cccaagtcccataacacgtcaatggaaaagacgactgagaagataaggcagctcaagact
gcgctaagtgagctgcagaaggatttggatcaggcaaacatagggaaacaatccataaag
aagaggaagttctgcacagaagcactcgaaaacaagattgtgaaacaaaaagagaagata
cgacgtatggaaatggaaatggagtcgaaagaggatctgaaaactattgcattgaatact
tcgaaaacaaattatcttgaccctcgaatcacagtatcctggtgcaaaaggaatgaagtt
cctattgaaaagatattcagcaaaacttatatggccaagtttatatgggctatggatgtt
gagccaaccttcagattctga
DBGET
integrated database retrieval system
