KEGG   Silene latifolia (white campion): 141628705
Entry
141628705         CDS       T11116                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf00040  Pentose and glucuronate interconversions
slaf01100  Metabolic pathways
Module
slaf_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    141628705
Enzymes [BR:slaf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     141628705
SSDB
Motif
Pfam: Glyco_hydro_28 DUF6046 Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 141628705
NCBI-ProteinID: XP_074297910
LinkDB
Position
2:21362160..21366743
AA seq 385 aa
MKYRMKAMFFVYILLLATISFTPGECDTKVFNLKDYGAIQGGNVDISQALLKAWGDACNW
KGGSKLEVPSATYLVNPVILKGPCRGPIEFHNSGTLKGPQGLRGDSWIEFQYIDGLTLNG
GVFDGQGPPKQAAPGLPTLLRFTFITNSRAQLVKLINSQSTHFHLFGCKQIVIDQISISS
PENSPNTDGIKIGESNGIDILKTNIESGDDCVALIRGSKDITVSGVTCGPGHGISIGSLG
ESENEQVEHVVVRQCRLFDTTNGLRIKTKASDMSGTVSNITYQDISFRNVDNPIVFDQNY
CPSRTCRQGNSRVQIKDIKFINVHGTSKINTAVVLQCSGSNPCKGIELKDINIAYYKYQA
STISNCSNVHGQSSGIQIPKPCISV
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgaaatatagaatgaaagccatgttttttgtttatatattgctcttagccactatttcc
ttcacacctggagaatgtgatacaaaggttttcaatttgaaagattatggtgctattcaa
ggtggaaatgtcgatatcagtcaggctttgttgaaagcatggggtgatgcatgcaattgg
aagggcggaagcaaattggaagtcccttcagctacttacttggttaacccggtaatattg
aaaggcccatgcaggggcccaattgagttccataattcaggcactttaaagggcccacag
ggcctaagaggcgattcttggattgaatttcagtatattgatggattgactttaaatgga
ggagtttttgatggtcaaggcccaccaaaacaggctgctcccggccttccaacgctacta
agattcacatttatcacaaattcgagagcacaattagtgaaactaatcaacagtcaaagc
actcatttccacctctttggttgcaaacaaattgtcatagaccaaataagcatatcatca
ccagaaaacagtccaaacactgacggaattaagatcggcgaatcaaatggcattgatatc
ttaaagacaaacatagagtcgggagatgattgtgtagcccttattcgcggtagtaaggat
attactgtcagtggggtcacttgcggtccgggtcatggtattagcattggaagcttgggt
gagtccgaaaatgaacaagtcgaacacgttgtggtaagacagtgtagactttttgatact
acaaatgggttgaggattaaaaccaaggctagtgacatgtctggcacagtaagtaatatt
acgtaccaagatatctcatttcggaacgtcgataatcccatcgttttcgaccaaaattat
tgcccgtccaggacttgtcgacagggtaattctcgagtgcaaataaaggacatcaagttt
ataaacgtacacgggacatcaaagataaacactgcggtagttttacaatgcagcggaagc
aatccatgcaaggggatcgagttgaaggacattaatattgcttactacaaataccaagct
agtacgatatcaaattgctctaatgttcatggccaatcttccggtatacaaatacctaaa
ccttgtatctcagtatag

DBGET integrated database retrieval system