KEGG   Silene latifolia (white campion): 141631228
Entry
141631228         CDS       T11116                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf04144  Endocytosis
slaf04145  Phagosome
slaf04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    141631228
   04145 Phagosome
    141631228
   04148 Efferocytosis
    141631228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:slaf04131]
    141631228
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slaf04147]
    141631228
   04031 GTP-binding proteins [BR:slaf04031]
    141631228
Membrane trafficking [BR:slaf04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    141631228
Exosome [BR:slaf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   141631228
  Exosomal proteins of other body fluids (saliva and urine)
   141631228
  Exosomal proteins of colorectal cancer cells
   141631228
  Exosomal proteins of bladder cancer cells
   141631228
GTP-binding proteins [BR:slaf04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    141631228
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA AAA_16 ATP_bind_1 PduV-EutP AAA_5 NTPase_1 RsgA_GTPase nSTAND3 Sigma54_activat AAA_22 NACHT AAA_7 AAA_24 nSTAND1 cobW TniB Septin
Other DBs
NCBI-GeneID: 141631228
NCBI-ProteinID: XP_074300029
LinkDB
Position
2:complement(173550852..173552682)
AA seq 213 aa
MSLSPIQRTLLKVIILGDSGVGKTSLVQRYVHKKFNQKFKPTIGADFITREIQIEGKLVT
LQIWDTAGQERFQSLGPAFFRGADSCVLVYDVNDKKSFNSLQMWRDEFIKQTDIPYPDKF
PFVVIGNKIDLDGGASREVESKKAKEWCSSIKGPLGVVPYFETSAKENQNVDEAFFDIAE
AALFLGCPQDIYYESMAGSLTEIVEPQNRGCAC
NT seq 642 nt   +upstreamnt  +downstreamnt
atgtcgttgtcgcctatacaaagaacattgctcaaggttataatccttggcgattctggg
gtgggcaagacctcgttagttcaaaggtatgtgcataaaaagttcaatcaaaaattcaaa
ccaacaattggcgctgactttattactagggagatacaaattgaaggcaaactagtcact
cttcagatatgggatacggccggacaagaaaggtttcaaagcctagggccagcatttttc
aggggagcagattcttgtgtattagtttatgatgttaatgacaagaaatctttcaattct
cttcaaatgtggcgtgatgaattcatcaagcagacggatattccatacccagataaattc
ccatttgtggtaattggaaacaagatcgatctagacggtggagctagtcgcgaggtggaa
agcaaaaaagcaaaagagtggtgcagctctataaaaggaccattaggcgtagttccatac
tttgaaacttcagctaaagaaaatcaaaatgtagatgaagctttttttgatattgctgaa
gctgctcttttccttggttgtccacaagacatctattatgaaagtatggccggttctctt
acagagattgtagagccacaaaatagaggatgtgcatgctaa

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