Silene latifolia (white campion): 141633076
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Entry
141633076 CDS
T11116
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141633076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141633076
Membrane trafficking [BR:
slaf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
141633076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
DUF6664
Motif
Other DBs
NCBI-GeneID:
141633076
NCBI-ProteinID:
XP_074301662
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Position
Y:13574181..13597263
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AA seq
790 aa
AA seq
DB search
MIADGVEDEEKYLSAGTAGLQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSKLSPHKY
YALYMRAFDELRKLEMFFYEEMKRGCSIIELYELVQHAGNILPRLYLLCTVGCVYIKSKE
APAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSGYEGDADTVTDAVEFVI
QNFTEMNKLWVRMRHQGPAREKDRREKERSELRDLVGKNLHVLSQIEGVDLDMYKDTVLP
RVLEQVVNCKDDLAQYYLMDCMVQVFPDEYHLQTLDILLGACPQLQPTVDIKSVLSSLME
RLSNYAATSPEVLPEFLHVDAFSRLNSVIGKVIEAQPDMPVVAVVILYSSLLTFTLHVHP
DRLDYADQVLGSCVSKLSVVGKLDDSNATKQIVKLLSAPLDKYNSVITALKLSNYPRVME
YLDNETNKVMAKIIIRSIMKNETYISVGDKVEALFELIKGLIKDTDGTFDDEDDEEDFKE
EQNAVARLVQMLHNDDPEVMFNIITIVHKHFLAGGVKRLPFTVPPLVFSSLKFIRRLQNQ
EATKSGDGVDAKPKKIFQLLNQLIEALLKVPAPELALRLYLQCAEAANDSDLEPVACEFF
TQAYILYEEEISDSREQVNALYLIIGTLQRMHIFGVENRDTLTHKATGYAAKLLKKPDQC
RAVYACSHLFWADDQDGVRDGERVLLCLKRALKIANAAQQMANATRGKGGSVMLFIEILN
KYLYFFEKGNNQITVNAIQDLMELITSEMQGDNAMSDPAAEAFFNSSLRYIQFQKQKGGA
VSERYEAVKA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagacggcgttgaagacgaagagaaatatctctccgctggaaccgccgggctt
caacaaaatgccttttacatgcatcgcgcattggattcgaataatctcaaagatgcgttg
aagtattcggcacagatgttgtcggagcttcggacttcgaaactttcgccgcataagtac
tatgcgctttatatgcgagcgtttgatgaattgaggaaattagagatgttcttttacgag
gaaatgaagcgaggttgttcgattattgagctttatgagcttgtacagcatgccggcaac
attttacctcgattgtatcttctatgtacagtaggatgtgtgtacataaaatcgaaagag
gctcccgctaaagatatcctcaaggatttggttgaaatgtgccgtggcatccaacatcct
ctacgagggctcttcttaaggagttacctttcacaagtcagtagggacaagttgcctgat
attggttcagggtatgaaggagatgctgatactgtcacggacgcagtcgagtttgtgata
caaaattttactgaaatgaataaactttgggtgcggatgcgacaccagggacctgctcgt
gagaaggatagaagggaaaaagaaaggagcgaactccgggatcttgttgggaagaatctg
catgtcctcagtcagattgagggggttgatcttgacatgtataaagatactgttcttcct
agagtcctggaacaggtggtcaattgtaaggacgaccttgcacaatattatctgatggac
tgtatggttcaagtatttcctgatgaatatcacttgcaaactcttgatatattgttgggc
gcttgtccacagcttcagccaacagttgatatcaagtcagttctctccagcttgatggaa
aggctctcaaattatgctgccacgagtccagaagtattaccggaattcttgcatgtggat
gccttctctagactaaacagtgtgattgggaaggtcatagaagcacagcccgatatgcct
gttgttgctgttgtaattttgtactcgtcgcttctcacgttcaccttgcatgtccatcct
gacaggcttgattatgctgatcaagttttgggatcctgtgtcagcaagctctccgttgtg
gggaaacttgatgatagcaatgcaactaagcaaattgttaaacttctaagtgctccgttg
gataagtataatagtgttattactgccttgaagctctctaactatccccgggtgatggaa
tatcttgacaatgaaacgaataaggtcatggcaaaaataattattcgtagcatcatgaaa
aatgagacgtatatatccgtgggtgataaggttgaggcattattcgaattgataaagggg
ttgatcaaagacactgatggtacatttgacgatgaggatgacgaagaggacttcaaggag
gagcagaatgctgtagcacgccttgtccaaatgctacacaatgatgatccagaagtgatg
ttcaatatcattactatagttcataaacatttcttggccggaggagtgaaacgtctacca
tttactgttccacctcttgttttttcttctcttaagttcattcggaggctccagaaccaa
gaggcaactaaaagtggagatggagtggatgctaaacccaagaagatttttcagttgctg
aaccagcttatcgaggctcttttgaaagttccagctcctgagcttgcattacgattgtac
ctacaatgtgccgaggctgcaaatgactcagatctagagcccgtcgcttgtgaattcttt
actcaagcttacatattatatgaagaagaaatttcggactccagagaacaggttaatgct
ttgtacctaattatagggactcttcaaaggatgcatatctttggtgttgagaacagggat
actctgacgcacaaagccactgggtacgcagcaaagcttttgaagaaacccgatcaatgt
agggcagtctatgcttgctctcatctcttttgggctgatgatcaggacggtgtaagggat
ggagagagggttttgctttgcttgaagcgagctttaaaaattgcaaatgctgcgcaacaa
atggctaatgctacacgtggtaaagggggatcagttatgctgttcattgaaatcctcaac
aagtatctctacttttttgagaaggggaacaaccagatcactgtcaatgcaatccaagac
ctgatggaactaattacttcggagatgcaaggtgataatgccatgtcagatccagctgcc
gaagctttctttaacagctctttgcggtacatccagttccagaaacagaaaggaggtgcc
gtcagtgagagatatgaggctgtcaaagcgtga
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