Silene latifolia (white campion): 141633117
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Entry
141633117 CDS
T11116
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141633117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141633117
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaf04147
]
141633117
Membrane trafficking [BR:
slaf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
141633117
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
141633117
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141633117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
BAR
PH
Ank
Ank_5
Ank_2
Ank_4
Ank_3
BAR_2
PH_11
PH_20
PH_8
PH_13
Motif
Other DBs
NCBI-GeneID:
141633117
NCBI-ProteinID:
XP_074301698
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All DBs
Position
Y:complement(416413493..416445321)
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AA seq
829 aa
AA seq
DB search
MHFGKLDDSPMFRQQLQGLEESSESLRERCQKFYKGSRKYTEGLGEAYDGDIAFASALEA
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMVNDRLLQFVNIDLHDVKE
ARKRFDKACLAYDQAREKFLSLRKGTKSDVATHVEEELHQARSTFEQARFNLVTTLSNIE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEHAALNER
MQEYKRQIDRESRWCSNGSNDSPNGDGMQAIGRSSHKTIDAVMQSAAKGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKDISKPSSSGPRNSGQRNGSELGSGLLSRWLSS
HYHGGMHDEKSVAHHTVNLLTATIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWI
EKITGVIASLLSSQTPERCMSTPMGCLHRSASESSSVESSDFDHNVNEESTSERCLTSLY
PDRPLRSSLQQRSYFKSEKTMDVLRRVSGNDKCADCGAPEPDWASLNLGVLVCIECSGVH
RNLGVHISKVRSLTLDVKVWEPSVISLFQSLGNAYANSVWEELLRSKGAFHVDLPPSSSL
KADKSHQIFISKPSAADSIAIKEKFIHAKYAEKLFVRKPKDTQHLRSLSQQIWEGVRTND
KKAVYRCIVNFEADVNAIYEISSSNSSVTLAKVMLLPEQTNHGQNTNEWTGDLSSKSSES
SNLSAENEIPSMEDLEGCHLLHLASEFADIGMLELLLQYGANVNASDSRGHSPLHRCILK
GKPIAARLLLTRGAVPLAMNREGKNALDLAKEVSFNDPEILALLSDFRG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcggaaagcttgatgattctcctatgtttcgccaacagcttcagggcttggag
gagagttctgaatcattaagggagagatgccagaagttttacaagggaagtcgaaaatac
actgaagggcttggtgaagcatatgatggtgatatagcatttgcaagtgctttagaagca
tttgggggagggcataatgacccgataagtgttgcttttggaggtcctgtcatgacaaaa
tttaccattgcgttaagagagattggaacctacaaggaagtacttcgatctcaggttgag
cacatggtgaatgataggttgttgcagtttgtcaacattgatttgcatgatgtgaaggaa
gcacgtaaacgttttgacaaggcatgtcttgcatatgatcaggctcgtgagaagttcctg
tccctgaggaagggaacaaaaagtgatgttgctacgcatgtggaggaggagctccatcag
gcaaggtctacatttgagcaagctcgttttaatctggtgaccactctttctaacatagaa
gcaaaaaaaagatttgaatttctggaagcagttagcgggacgatggatgcacatcttcga
tatttcaagcaggggtatgagctcttgcatcagatggaaccgtatataaatcaggtcttg
acttatgctcagcaatcaagagaaaggtctaattatgagcatgcagctcttaacgagagg
atgcaggagtataaaagacagattgaccgtgaaagtaggtggtgttctaatggatctaat
gactcccctaatggtgatggtatgcaagcaattggtagaagttctcataaaactattgat
gcagttatgcaatctgctgcgaaaggaaaggttcaaaccatacgacagggttacctgtcg
aaacgttcatctaacttgagaggtgactggaaaaggaggttttttgtcctcgacagtaga
ggaatgctttactactacagaaaggacatcagcaaaccttccagctctggacctcgtaat
tcaggtcagaggaatggttcggaacttggatctggattgctaagtcgttggctttcttca
cattaccatggtggcatgcatgatgaaaaatcagttgctcatcatactgtcaatctactt
actgcaacaattaaagttgacgcagaccagtccgatttacgcttttgcttccggatcatc
tcaccaacgaaaaactacactttacaggcagaaagcgctttggaccaaatggattggatt
gagaaaataacaggcgtcattgcttccttacttagttctcaaacccctgaaaggtgtatg
tctactcccatgggatgtcttcatcgatcagccagtgagagtagttctgttgaaagttcc
gattttgaccataatgtaaatgaagaaagcacttctgaaaggtgcctcacatcactgtat
cctgataggccattgagaagttcactacaacaacgttcttactttaagtctgaaaaaacg
atggatgtgctgcgacgggtgagtgggaatgataagtgtgctgattgtggagctcctgag
cccgactgggcatccttaaatcttggggtcttagtctgcattgaatgttcaggtgttcat
cgtaaccttggtgtccacatatcaaaggttagatcactgacacttgatgttaaagtgtgg
gagccctctgttatctcattgtttcaatctctgggcaatgcttatgccaattcggtatgg
gaagagttgttgcggtcaaaaggtgcttttcatgttgatcttccaccttcaagctcattg
aaggctgataagtcccaccagatttttattagcaaacctagtgctgctgattcaatagcc
ataaaggaaaagttcatccatgcaaagtatgcagaaaagctttttgttcggaagccaaaa
gacacgcaacatctacggtcattgtcacaacaaatatgggaaggtgtccgtacaaatgat
aagaaagcagtgtatcggtgcattgttaactttgaagcagatgttaatgccatatatgag
atttcatcctcaaactcttctgtaactcttgccaaagtaatgctgttaccagagcagaca
aaccatggccaaaataccaatgaatggactggagatttgtcttccaaatcctcggagagc
tctaatttgtctgctgaaaatgaaatcccaagcatggaagatctagaaggttgccacttg
ctccaccttgccagtgagtttgctgacataggcatgttggagctgcttctgcaatatggt
gcaaatgttaatgcgtccgattccagaggtcactcaccacttcatcgatgtattctaaaa
ggaaaaccaatagcagcaagattgcttctcaccaggggagcggttccattagccatgaac
cgtgaaggcaagaatgcgcttgatcttgcaaaagaagtaagcttcaatgatcctgagata
ctggctttactgtctgacttcaggggatag
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