Silene latifolia (white campion): 141633142
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Entry
141633142 CDS
T11116
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141633142
03036 Chromosome and associated proteins [BR:
slaf03036
]
141633142
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
141633142
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
141633142
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
141633142
microRNA pathway
RISC loading complex
141633142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
141633142
NCBI-ProteinID:
XP_074301712
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Position
Y:complement(46471512..46479223)
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AA seq
933 aa
AA seq
DB search
MSFRGGRGGGDGGRRGGYNGGRGSRRGPFGRDGERGGDGGRGGGRGGGGYRGPSVGVLTP
AVWAEAENQPLEKELQQKLAVSTPALSSVTKPPPRPGFGRIGMKCVVRANHFLVQLSDRD
FHHYDVSISPEISSKNLCREIMSKLLEQNPQYLGKRIPAYDGMKSLYTAGPLPFTSKEFV
VELPRERKGGSNSESRKFEVSVKLASRVDVHHLKEFLSGRNTETPQDAIQVLDVVLRAAK
SLKEYVIIGRSFFSEDLGKGNLADGIEFWRGYYQSIRPTQMGLSLYIDSSARPFFKPLCV
TSFVMENVKLRDLSRPLNDAARLKVKKALRGITVETKHMGYRKCYKVIGISNEPANQIMF
SLGNEESQLSVAQYFREKYKIQLKFPALPCIQVGSSKKPTYIPMELCMIVNGQKYPKKLN
TDQVTALLKATCQRPGDREHNIITMVKDNKFGGNEMVNQEFGMQISEMCTSVDARILPPP
MLKYHESGKERQVAPAVGQWNMIDKKMYNGATVDRWTCLNLSTSVNAEIMQLFCMDLISM
CSSKGMAFKRNPFIPPIIAHVNQLERVLPDIDRQAKNQLQLLIIILPDYTGTYGTIKKIC
ETELGIVSQCCKPNHVMRGQKQYLENVALKINVKAGGSNSVLLDAISRKIPRLTDCSTII
FGADVTHASPGEDCSASIAAVVASMDWPDVTKYKGIVSAQSHREEIIQDLYKEVDGKPSG
MIRELLISFYRLTGQKPKRIIFYRDGVSEGQFAHVLLHEMDAIRKACATLENGYLPPVTF
VVVQKRHHTRLFPVDNNLTDKSGNIIPGTVIDTKICHPSAFDFYLCSHAGIQGTSRPTHY
HVLLDENKFTADLLQLLTNSLCYTYACCTRSVSVVPPAYYAHLAAFRARYYVEGMTMSES
GSSSALDMTQSSQAHIAMLPKIKDNVKNVMFYC
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcgcggcggacgtggtggtggtgacggtggaagacgcggaggttacaacgga
ggccgtggcagtcgacgtggaccgttcggacgagatggagaacgcggtggtgacggtggt
cgtgggggaggacgcggtggcggagggtaccgaggaccatcagttggagtactcacacca
gcagtatgggcggaggcggaaaatcagccgttggagaaggagcttcaacagaagttagcc
gtgtcgactccggcattgtcttcagtaactaaaccgccgccgagacccgggttcggtcgg
atagggatgaagtgtgttgttagggctaatcattttctggttcaactttctgatcgtgac
ttccatcattacgatgtatctatatctccggaaatatcttcaaagaacttgtgcagagag
ataatgtcaaaactgctagaacaaaatcctcagtatttggggaagcgcataccagcgtat
gatggcatgaagagtctctacactgctggccctttgcctttcacttctaaagaatttgtt
gttgagctgcccagggaacgtaaaggaggttcaaacagtgaatcgaggaaatttgaggtt
tctgtaaagttggcttcaagagttgatgtccaccatttgaaggaatttctctccgggaga
aacactgaaacaccacaagatgccatacaagttcttgatgttgtcttgcgagctgcgaag
agtttgaaagagtatgttataattggaagatctttcttttctgaggatttgggcaaaggg
aatctggcagatggtattgagttctggaggggatactatcaaagtatccggcctactcag
atgggactatctctatacattgattcatctgctcggcctttcttcaaaccattatgtgtt
acctcattcgtgatggagaatgtgaagttaagagatctttccaggccacttaatgatgct
gctcgtttgaaggtgaagaaggctttaagaggcataactgtggaaacaaaacacatgggc
tacaggaagtgctataaagtgatcgggatatcgaacgaaccagcgaatcaaattatgttt
tctctcggtaatgaagagagccaattgtctgttgctcaatatttccgagaaaagtacaaa
attcagctgaaattccctgctttgccatgtattcaagtgggatcgtccaaaaagcctaca
tacatccccatggagctttgcatgattgtgaatgggcaaaagtacccaaaaaagttgaat
acggatcaagtgacagcacttctgaaagcgacatgccaaagaccgggtgaccgggagcat
aatatcatcacgatggttaaagataataagtttggaggaaatgaaatggttaatcaagag
tttgggatgcaaatttctgaaatgtgcacatccgttgatgcccgaatcttgcctccacca
atgcttaagtaccatgaaagtggaaaggagcgacaagttgcaccggctgtgggacagtgg
aatatgattgataagaaaatgtacaatggtgctactgttgatagatggacatgcttaaac
ctgtctactagtgtgaatgccgaaatcatgcagctgttttgtatggatttaatttctatg
tgttctagcaagggaatggcattcaaaaggaacccctttattcctccaatcatagctcat
gttaatcagcttgagagagtcctacctgatatagacaggcaggctaagaatcagttgcag
ttactcattattatactgccagattatactggaacttatggaactataaaaaagatttgt
gaaactgagcttggtattgtctcccagtgctgtaagcctaaccatgtcatgagaggacaa
aagcaataccttgaaaatgtggctttgaaaatcaatgtgaaggctggaggaagcaactct
gttttgcttgatgctatctcaaggaaaattccacgcttgacggactgctcaacaataatt
tttggagctgatgttacacatgcctctcctggagaagattgcagtgcttcaattgcagca
gttgttgcttccatggactggccagatgttaccaaatacaaggggatcgtctcagctcag
agtcacagggaagagataatacaggacctttacaaagaagttgatgggaagccttctggg
atgatcagggaacttttgatttctttctacaggttaacagggcagaagcctaaaaggatc
atattctacagagatggagtgagtgaaggccagtttgcacatgttctgcttcatgaaatg
gatgctataagaaaggcttgtgctactttggagaatggctacctgcctccggtcacattc
gtggtggtgcagaaaaggcatcatactcgtcttttccctgttgacaacaatctaactgac
aagagtgggaacatcattccgggtactgtaattgacacgaaaatctgccatccgtctgcg
tttgacttctacctgtgcagtcatgctggtattcagggaacgagtaggccgacacactac
catgtgctgcttgatgagaacaagtttacagcagatctgcttcagctcctcaccaacagt
ctatgctatacttatgcctgctgcactcgatcagtctcagttgttcctccggcatactat
gctcatctggcagcattcagagctcgttactacgtggaagggatgacaatgtcagaaagt
ggatcgtcaagtgcactggatatgactcagagtagccaggcacatatcgcaatgctgccc
aagatcaaggacaatgtgaagaatgtcatgttttactgctga
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