KEGG   Silene latifolia (white campion): 141633333
Entry
141633333         CDS       T11116                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03030  DNA replication
slaf03410  Base excision repair
slaf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    141633333
   03410 Base excision repair
    141633333
   03420 Nucleotide excision repair
    141633333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slaf03032]
    141633333
   03400 DNA repair and recombination proteins [BR:slaf03400]
    141633333
Enzymes [BR:slaf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     141633333
DNA replication proteins [BR:slaf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    141633333
DNA repair and recombination proteins [BR:slaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      141633333
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 141633333
NCBI-ProteinID: XP_074301915
LinkDB
Position
Y:complement(444455403..444477227)
AA seq 2218 aa
MNPFGGGRGRGRGGDFRRRDDSRRKQQQQQLFRTAEDVLEAKLGVDIFTEGDKRLGWLLT
LSTSSVQDQETRNVYSCVDLYFVTQEGGYFKVKYKFRPYFYAATKDKMKTDVEMYLKRRY
ENDIAGIDILEKEDLDLKNHLSGLRKSYLKISFDTVQQLMNVRNDLVRVVERNRTKFEAA
QAYESIITGKSEQRVQDFVDCITDLREYDVPYHVRFCIDNDVRCGQWYDVSISTTGVVLD
RRLDLLQRAEVHVCAFDIETTKLPLRFPDAEYDSIMMISYMVDGQGYLIINREFVGDDIE
DLEYTPKPEFEGCFRVTNVKNEKELLRSWFSHMQEVKPGIYVTYNGDFFDWPFLERRVAE
HGYKMSDEIGFQCDKVQGECRARFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPM
EVNPEDMVDFAKSKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGS
GTLCEMLLMVQAFNANVICPNKHQSEPEKFHNSKLLESETYIGGHVECLESGVFRSDLPT
SFKLEPSAYQQLIDNLDRDLQYAIKVEGKMDLDIVSNYDEIKDAIRDKLTCLRDGPIREE
GPLIYHLDVAAMYPNIILTNRLQPPSIVTDEDCTACNFSRPGKVCLRKLEWVWRGETYMA
KKSDYYHLKRQIECESVESIDGQSSKSFLDLPKADQQLKLKDRLRKYCQKAYKRVLDKPT
TEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKSSGNPIKIQEAQNMV
ILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLE
LDTDGIWCALPGSFPENFTFKTKDSKRKLTISYPCVMLNVDVARNNTNDQYQTLKDPVNR
TYATHNECSIEFEVDGPYKAMILPASKAEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL
KLIKVFQAEMFDKFLDGSTLEECYAAVANVANRWLDLLDNQGKDVADSELLDYISESSTM
SKSLVDYGEQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAIPVAIF
ETENETMKSYVRKWCKISSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVTNPVPRV
VHPDWLHKKVREKEDKFRQKNIKDLFSSKRDALEKDGAATSGSVNGRNNKHNITDMEDFG
NLDGAGVGSRPVVQSYEVNGRDSNQTIHDQGRDGGVEFQNVASVEEVDKTVDYAGWLEQK
KRKWKDNREKRKRQRLCDAKTSKHGPGVSNIRECVNNKKKNIRRSGVSSYFKRQELSLTS
SYWQVLQLVPSDLPGQFFAWVVVEDSMLKIPISVPRVFYLNSRATEEFPGRRVNKILPHG
GRSYNLIEIIIDEMKFREESKRLMAHLADPEVEGIYETKVPPEFNAVLQIGCVCKVDKGA
KKRNAQAEWSVNELQMKTTAECHYLEMSLSFFYLYHSCCEGRAVYGGYFPASSMISFVVV
DPHQNKGLNSTNIKRFYHEACQALPIDPSISQGVISYKVDYVVENHEAERIMQRTISKHR
PQTNRPCLAVTECPSIHLLKTGIQVLNDLPCVSIPANARDSQYPAIGWQTVAAKIALQRC
AASSQWLHERISLSRYAHVPLGNLDLDWIIYTIDIFFSRALRDNQQVLWISEDGVPDLGG
FNKDNSCFVDEVNQPVLVYPGAYRKITVELKIHHLAVNALLKSSLINEIEGSGLYGFEQD
TDAEPHTSSDQYSFDETTSCGSAFWVLKQLVQRCLQDAITSGNVFADAILQHLYRWLCSP
QSKLHDPSLHTMLCKVMQKVFALLLAEFRKLGATIVFANFSKIILDTGKADLSAARAYCE
RLLKALQTRDMFEWIEIEPLHFWHSLLFMDQYNYGGIQAKDSDAASASSSTFSSGELQVD
IVSSWNIAEYLPKTTQDHFVVTVSEFMYKPWEYALNQTTNESFLEDGDLCTPSITASVAE
KFEARLNEYLRDQISCYFSDKLFTIVREIVRHSKAVKIPQNDELSKVDPQLSGNVYTGDS
ALEFIKHVCAVLALDQNVQHDVLVMRRNLLRYIRVKEFAPEAEFSLSHPSFVLPNMICSY
CNDVRDLDLGRDPTLLTEEWRCGVPQCGHPYDREKVENSLLQIARQRERLYHLQDLVCVK
CHMVKDRHLTAQCKCAGPFKCLEDPTKFRRKMLVFYKIAVQQNFQLLRDCVAWILEIR
NT seq 6657 nt   +upstreamnt  +downstreamnt
atgaatccatttggcggaggcagaggcagaggcagaggcggtgattttcgacgtcgagac
gatagtagaaggaaacagcagcagcaacaattattccgaactgctgaagatgtgcttgaa
gctaaattaggggttgatattttcactgaaggcgataagcgtctcggatggcttctcacc
ttatctacttcgtcggtgcaagatcaagagacgaggaatgtgtacagttgcgtagattta
tatttcgttactcaggaaggtggttattttaaggttaaatacaagttccggccatatttt
tacgcggccacaaaagataaaatgaaaactgatgtagaaatgtatttaaaaagacggtac
gagaatgacattgccggaattgatatattagagaaggaagaccttgatcttaaaaaccac
ttatctgggcttcggaagtcatacttgaagatatcatttgacactgtgcaacagttgatg
aatgtgaggaatgacttggtacgagttgttgaaagaaaccggacaaagtttgaagcagct
caagcatatgagtctataatcacgggtaaaagtgagcaaagagttcaggattttgtagat
tgtataactgatctccgtgaatacgacgttccatatcatgttcgattttgtattgataat
gatgtaaggtgtggacaatggtacgatgttagtatttctactactggagttgtccttgat
aggagacttgatttgctacaacgtgcggaagttcatgtctgtgcatttgatatagagaca
acaaaacttcctttgagatttccagatgctgagtatgactcaataatgatgatatcatac
atggttgacgggcaaggatatttaattatcaaccgagagtttgttggggatgatatagag
gatttggagtacacaccgaaaccagagttcgaaggatgtttcagagttacaaatgtgaaa
aatgagaaagagctgctgagatcctggttttctcacatgcaagaagtaaaacctggtata
tatgtgacatataatggagatttcttcgattggccatttttggagcggagagtagccgaa
catggttataaaatgagtgatgagattggattccagtgtgacaaggttcaaggtgaatgc
cgtgcaagattttcttgccacctggattgctttgcctgggtaaagcgtgatagttatctc
cctcagggtagtcagggcctgaaggctgttacaaaagccaaattaggttatgatcccatg
gaggtgaatcctgaagacatggttgattttgcgaaaagtaaacctcagatgatggcctca
tattcagtctctgatgctgttgcaacttattatttgtacatgacatatgttcatcctttc
atattttctcttgccactataataccgatgccgccagacgaggttttgcgaaaaggaagt
gggactctatgtgagatgcttttgatggtccaggcctttaacgcaaatgttatctgtcct
aacaaacatcaatccgagccagaaaagttccacaacagtaaacttttggagagcgagact
tacattggtggtcatgtggaatgccttgaaagtggtgtttttagatctgatcttccaacc
agtttcaagcttgagccatctgcgtatcagcaactcattgacaatcttgatcgtgacctg
caatatgcaattaaagtggagggcaagatggacttggatatagtctctaattatgatgaa
atcaaggatgcaattagagataagcttacttgcttacgggatggacccatacgggaagaa
gggcctctgatatatcatttggatgtggctgctatgtaccctaacattatcttgactaat
aggcttcagcccccgtctatagttacagatgaggactgcactgcatgcaattttagtcgt
cctggaaaagtttgtcttcgtaaacttgaatgggtttggcgtggagaaacctacatggct
aagaaaagtgactattatcatttgaagagacaaattgagtgtgaatcagtggaaagtatt
gatgggcaatcctccaagtcgttccttgacttaccaaaggcggatcaacagttaaagctc
aaagatcgtctacgcaaatactgtcaaaaggcatacaagcgggttcttgacaagccaaca
actgaggttcgtgaagcagggatatgcatgagggaaaactctttttatgttgatactgtt
cgcagctttcgagatagaaggtatgagtataaaggactcaacaaagtgtggaaagggaag
ttgtctgaagcaaaatcaagtgggaatccaataaagatccaggaggctcagaatatggtt
atcctgtatgattctttgcaacttgctcataagtgtatcctcaattccttttacggatat
gtcatgcgcaaaggtgcaaggtggtactccatggaaatggctggtgtggtcacctacaca
ggggcaaaaatcattcagaatgctcgcttactggttgagaaaattggtagaccacttgaa
ttagatacagatggaatctggtgtgccttacctggatctttccctgagaactttaccttt
aaaacaaaagactcaaagaggaagctgacaatttcttatccgtgtgttatgttgaatgtg
gacgtagctagaaataatacaaatgatcagtatcagacactgaaagatcctgtcaataga
acatatgcaacccataatgaatgctcaatcgaatttgaagttgatggtccttacaaggcg
atgattcttcctgcatccaaggcagaagggatactgatcaagaagaggtatgcagttttc
aacgatgatggaaccttggcagagctgaaaggttttgagattaagcgcagaggtgagctt
aagctcatcaaggtgttccaggctgagatgtttgacaaatttctggatggatcaaccttg
gaagaatgctatgctgctgttgctaacgttgccaatcgctggcttgatcttcttgataat
caagggaaagatgtagcagatagtgagctcctggattacatttctgaatcaagcaccatg
agcaagtccttggtagactatggtgaacaaaaatcttgtgccgtaaccactgctaagcgt
cttgctgacttcctaggagataccatggtcaaagataaggggcttcgctgtcagtatata
gttgcatgtgagccaaagggcacaccagtaagtgagagagcgattccagttgcaatattt
gaaactgaaaacgaaaccatgaaatcctacgtgcggaagtggtgcaagatctcatcagat
gtaggcattagatccatcattgattggtcttattacaaacaacgtcttagttcggccatt
cagaagatcattactattccagctgcgatgcaaaaggtaacgaatcctgtacccagggtc
gttcatcccgattggctacacaagaaggtgcgagaaaaagaggataaatttcggcaaaag
aacataaaggatttgttctcttctaaacgagatgctttagaaaaagatggtgctgctact
tctggctcagtaaacggtagaaacaataaacacaatatcaccgatatggaggactttgga
aacttggatggagctggagttggcagtagacctgttgtccaaagttacgaagttaatgga
cgagattctaaccagacaatacatgaccaaggtcgtgacggtggtgtagaatttcagaat
gttgcgtcagttgaggaagtagataagactgttgactatgcaggatggcttgagcaaaag
aagcggaaatggaaagataaccgggagaagagaaaaagacaaaggttgtgcgatgcaaaa
acatcaaaacatggtcctggtgtttctaatatacgtgaatgtgtgaataataagaagaaa
aatattcggagatctggggtcagttcatatttcaagaggcaggaattgtctctcacaagc
agctattggcaggttttgcagctggtcccaagtgatctgcctggtcaattttttgcatgg
gttgttgtggaggatagtatgcttaagattcccatcagtgttcctagagtcttctacctc
aactccagagctactgaagaatttcctggaagacgagttaacaagattctccctcatgga
ggtcgcagctataacttgattgagataatcatagacgagatgaaatttagagaagaaagc
aagagactaatggcccatcttgcagatccagaagtagagggcatatatgaaaccaaagtt
cctccagaatttaatgctgtcctccagataggctgtgtctgtaaagtggataaaggtgca
aaaaaaagaaatgcccaagctgagtggagtgtaaatgaactgcagatgaaaacaacggct
gaatgccattatcttgagatgtccctctctttcttttacttgtaccacagctgttgtgaa
gggcgggcagtatacggagggtacttcccagcttctagtatgatttcttttgttgtagtt
gatccccatcaaaataaagggttgaattctactaacattaagagattttatcatgaagct
tgccaagctttgcccatagatccttccatttctcaaggtgtcatctcatacaaggttgac
tatgttgttgagaatcatgaagctgaaaggattatgcagagaactattagcaaacacaga
ccacaaaccaaccgtccttgccttgctgttactgagtgcccgagtattcatctgttgaag
accggtattcaagttctgaatgacctaccttgcgtgagcatccctgccaatgcccgtgat
agtcaatatccggctattgggtggcaaactgttgctgcaaaaattgccctgcaaagatgt
gcagcatcatcccagtggctgcatgagaggatttctctttcaagatatgcacatgtacct
cttggaaaccttgaccttgactggattatatacactatagatatctttttctctagagct
ctgcgtgataatcagcaggtactctggatttctgaagatggtgttccagatttaggtggc
tttaacaaagataactcttgctttgttgatgaggtcaatcaacccgttctagtctaccct
ggagcatatagaaagatcacagtggagcttaagattcatcacttagctgttaatgctctt
ctgaagagcagtctaatcaatgaaattgagggcagtggtttatatggatttgagcaagat
acagatgcagagccacacacgtccagcgatcaatatagttttgatgagactacttcctgt
ggatctgcattctgggttctgaaacagttggtccaaagatgcctgcaggatgcaattaca
tcaggaaatgtttttgctgatgcaatactacaacatctttatcgatggctttgtagccca
cagtctaaacttcatgatccctcccttcacacaatgctttgcaaggtgatgcaaaaggtt
ttcgcattactgttggcagagttccgtaaattgggtgccacaattgttttcgcaaatttt
tcaaaaattattctagacactggaaaggcagacttatcagcggcaagagcatactgtgag
cgcttgcttaaagcattacagactagggacatgtttgagtggattgagattgaaccacta
cacttttggcactccttgcttttcatggatcagtacaattatggaggcattcaggccaaa
gattccgatgcagcatctgccagctcttcaactttctcttctggtgaacttcaagtggat
attgtgtccagttggaatattgctgaatacctaccaaagacaactcaagaccattttgtt
gttacagtctctgagtttatgtataaaccgtgggagtatgccctgaatcaaactacgaat
gaatcatttcttgaggatggtgacctgtgcacaccatcgatcacagcttccgttgccgag
aagttcgaggcacgtttgaatgaatatctcagagatcagatcagctgttatttctcagac
aaactttttacaatcgtccgcgagatagtccgtcattcaaaagctgtgaagatacctcaa
aacgatgagttatcaaaagttgatcctcaactttctggaaatgtttatactggggacagc
gcattggaatttatcaagcatgtctgtgctgttttggcattggaccaaaatgttcagcat
gatgtcctggtcatgagaaggaatttgttacgatatatacgtgtcaaagagtttgctcct
gaagccgaatttagcctttctcatccgtcctttgtgttacccaacatgatttgcagctac
tgcaacgatgtaagagacctcgacctggggagggacccaaccctgctgacagaggagtgg
cgatgtggagtgccacaatgtgggcatccttacgaccgagagaaggtagaaaactcgctt
ctccaaatagcaaggcagcgcgaacgcctttaccatctgcaagatttggtatgtgtcaag
tgccatatggtcaaggatcgtcacctgaccgcgcaatgcaaatgtgccggtccattcaaa
tgccttgaagatccgactaagttccgtagaaaaatgcttgtgttttataaaatagctgtc
caacaaaatttccaactcttgagagattgtgtagcttggattctggaaattaggtaa

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