Silene latifolia (white campion): 141633366
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Entry
141633366 CDS
T11116
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
141633366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141633366
Enzymes [BR:
slaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141633366
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
U-box type E3
141633366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
zf-Nse
Neurochondrin
zf-C3HC4_4
DUF4527
KAP
zf-C3HC4
Arm_2
MLKL_N
zf-C3HC4_2
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
141633366
NCBI-ProteinID:
XP_074301958
LinkDB
All DBs
Position
Y:450178381..450183392
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AA seq
656 aa
AA seq
DB search
MEEEKVCQELLLNNIISKINEISLITVFRPSVKKEYCNLARRLKLLIPMFEEIKEIDHQP
LSNDAVSSLVDFSHSLSLALDLLRFGSLGSKIYLALEREQVMAKFNEITSNLEHALDGIS
YQDLDISDEVKEQVELVITQFRRAKGRVDVLDAGLHEDLLSLHESNDATIDPTLLKRVCE
KLQLLKLDDLTQESVALTELIAPNGGDPGEKIEKMCNLLKKVKEFARTENPNMESSSKEK
NPSPGSSGLTPADGSPKCLAIPDDFRCPISLEIMKDPVIVSTGQTYERSCIEKWIKSGHN
TCPKTQQTLLNSSLTPNYVLRSLISQWCEANGVDPPKRPGLTPTSKDTSASSATERSKIE
ELLHKLYSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVHLLSIPDSRTQEHAV
TALLNLSICDDNKGSIINSGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGSS
GAITPLVMLLSEGNQRGKKDAATALFNLCIYQGNKGKAIRAGIVPILMRLLMEPGGGMLD
EALAILAILSSHPEGKAAIGSADTLPVLVDVIGNGSPRNKENACAVLVHLCSGDNSYFVA
AQDLGVTGYLQEMAQTGTERGRRKAQQLLEWINLYNELQALMPVKAEGHEPTVAEG
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaaaaagtgtgtcaagaattgttattaaacaatataatctcaaaaatcaat
gaaatttcactaattactgtatttcgtccttctgtaaagaaagaatactgtaatttagca
aggagattaaagttgttaatcccaatgtttgaagagattaaggaaattgatcatcaacct
ttatcaaatgacgccgtttcatctcttgttgatttcagtcattccttatctcttgctctt
gatttgcttcgttttggctcccttggcagcaagatttacctggccctggagagggagcag
gttatggctaaattcaatgaaattacgtctaatttggagcatgctttggatggaatctca
taccaggatcttgatatctctgatgaagttaaggaacaggttgagctcgtgataacacaa
tttagaagagccaagggaagggttgatgtgcttgatgcgggactccatgaagatctgttg
tctctccatgagagcaatgatgcaactattgacccgactctattgaagagagtatgtgaa
aagctgcagcttctgaaacttgatgatctgacacaagagtctgtcgctctaactgagttg
attgctccaaatggtggagatcctggtgagaagatagagaaaatgtgtaatctattgaag
aaagttaaagaatttgctcggactgaaaacccaaacatggaatcttcttcaaaagagaag
aatccttcacctggttcttctggactaacacctgctgatgggagtcccaagtgtcttgct
ataccagatgacttccgctgcccaatttcattagagataatgaaagatccagttatcgtt
tcaactgggcagacatatgaacgttcgtgcattgagaaatggataaaatctggtcataac
acttgcccaaagacacaacagaccctcctgaactcttctctcacccccaactatgttctc
agaagccttatatcccagtggtgtgaagcaaatggggtcgacccacccaagcgacctggc
ctgaccccaaccagcaaagatacatcggcgagctctgcaactgaacgttcaaagattgag
gaactccttcacaagctctactctggcaaccctgaagaccaaagatcagccgccggcgaa
atccgacttcttgcaaagcgaaatgccgataaccgtgtcgcaatcgccgaggccggcgct
atcccgctactcgtgcaccttctttcaatccccgattcccggacccaagaacacgccgtg
actgcccttcttaatctctccatatgcgacgataacaaaggaagcatcatcaactcaggg
gctgtgcccggaatagtacatgtgttgaagaaaggtagcatggaggcgagagaaaacgca
gccgctacccttttcagcctatcggttgtggatgaaaataaggtaaccattggttcttcg
ggtgcaatcacacctcttgtaatgttactaagtgagggtaatcaaagaggaaagaaagat
gccgcgactgcccttttcaacctatgcatataccaaggaaataaaggcaaggctataaga
gccggaatagtgcctatattaatgaggctattaatggagccaggtggtgggatgttggat
gaggcattggcgattctagctatactgtcgagccatcctgaaggaaaagcagccatagga
tcggctgacactttacctgttttggtggatgtgattgggaatggatctcccagaaacaaa
gagaatgcatgtgcagttttagtgcatctttgctcaggagataatagctactttgtagca
gcccaggatcttggagttacgggttatttgcaggaaatggcccaaaccggcactgaacgg
ggcagaagaaaagcccaacaattacttgagtggataaatctgtacaacgagctgcaggcc
ttgatgccagttaaggctgaagggcatgagccaaccgtggctgagggctga
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