Silene latifolia (white campion): 141633387
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Entry
141633387 CDS
T11116
Name
(RefSeq) sister chromatid cohesion protein SCC2-like isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slaf03036
]
141633387
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
141633387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
Cnd1
PHD_2
INTS1_R4
PHD_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
141633387
NCBI-ProteinID:
XP_074301970
LinkDB
All DBs
Position
Y:452687262..452707956
Genome browser
AA seq
1795 aa
AA seq
DB search
MNYNQNEWSQRGITLSNTLHSEVAPCLPLPSLPAFTGSADEELRLSDDRVTRLLNRRDVL
AQASKIADLLRHTDVSYLNLKNDVASDAISVNERSELCEEVLRCDHDAFECSRPGSLEER
ISSAVSDKNTNQKIEYSSNQAQKDHIETRQHEQSKAVDDVPLPSKKTRAKKKESQGVSTS
APMDPGEHQDSVVGRFCDVLEELCSRAEIPGEELEEAEWLQLSTSDIRTILKEVLSIRTQ
NMLHLVPVNILVRLLKVLDNQIHRAEGISIDECENSDSDVSLIFCALESIHAALAVMVCN
DMPKQLYKEEIIERILEFTRRQVMDIMSACDPSYRALHQPGDNGIAEGEDNPDDGAEYGS
ASKRRRTTKSFKSKRTSTNRISTAVNTVCQKLCTVLGFLKDLLFIERLSDSCILQLVKTC
LATLLVDNIQLLQMKAMGLISGIFYSYTQHRSHVVDEVVQLLWNLPFSKRAARAYHLPDE
EQKQIQMITALLLQLVSHSANLPETLRQPSSNRAIFETTIESGYLIKCNEAATETCVSFW
THVLQRLTTVKSQDASEVKVIMENLVLDLLTTLNLPEYPAASLILEVLCVLLLQNAGPKS
KDTSIRSMAIDILGSIAARLKHDSARCQKENGWIVQGILGRENVNEGEQADTCSVCLDGV
MEKALLICHGCQRLLHPDCMGVREHDIATRGWHCPFCLCRKQLLVLHSYCKSQCKDDKTN
HVHSPTTESDSNMEIVQQMLLNYLEDNGSYDDLHLFARWFYLCLWYKDDPQSQQEFSYRF
ARLKLKAVIRDTGALSSVLSRDFIKRINLCLGQHNSFSRGFDTILAMLLVSLRENSPVIR
AKALRSVSIIVEADPDVLRDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPDVGVQY
FDKVAERIKDTGVSVRKRAIKIIRDMCTSNADFVETTRACIEIISRISDEESSIQDLVCR
TFYEFWFEEPSGKQYFGDDSSVPLEMTRKTEQIVDMLKKMPNHQALVTVIKRNLALDFLP
QIKGTGISSLALAAVRKRCELMCKFLLERILQVEEMNVEEGEIRILPYITALHAFCLVDS
SLCAPSSNPSQFVVTLQPYLKNQVDNRVVAQLLECIIFVIDAVLPLLRKLPPSVVDELEQ
DLKQMIVRHSFLTVVHACIKCLCSLNKIAGKGGRLIQFLIQVFVKRLDALGIDNKQQVGR
SLFCLGLLIRYGNSLLIAFDGSIDISSKLNLFKKYLLADDFGIKVRALQALGFVLIARPE
FMLEKEVGKILEATLSSSSDTRLKLQVLQNIYDYLLEAESQLGSDTVGDNVADNSQDGSS
VVPEAAGAGDTNICGGIVQLYWENILERCLDTNEQVRQSGLKIVEVALRQGLVHPITCVP
YLIALETDPLEVNSKLAHHLLMNMNEKYPAFFESRLGDGLQLSFNFIRSMKTNSVNLNSK
LQYKVVENMKGKSEDASFVNARLGVSRIYKLIRANRVARNKFMSSVIRKFDNPSWSATVV
HFLMYCTEILALLPFMAPDEPLYLVYSINRVIQVRSGTLEASLKAFSTHFSQRNTQKVAT
ENGSWQQLAAAQLSVNSISLELNGTFQLPGEGHFTSHSMETDENMHCRSFRFTEDDQQRI
QAVCIAATALQLLLKLKRHLKVVYSFDDVRCQAFSPTEPPKACEALSRQNIPFGIGDMST
ILPSTPEELHQRYQEFKNALREDTVDYSAYSANIKRKRPTPSKRGGRARRAMVRDDEDSD
VEDERKRTPSKRGVKASRAINRDDEDSDVEDEDCTGGRRNYGARQSNGVRSSRRF
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaatcaaaatgaatggagtcaacgaggaatcacactgtcgaacacacttcac
tcagaagtcgcaccttgcttacctcttccgtctcttccggcgtttactggttccgctgac
gaagaacttcgtctttcggatgatcgtgttacgcgtttgcttaatcgtcgtgatgttctt
gctcaagctagcaagattgctgatcttcttcgtcacaccgatgtctcttacttgaacctg
aagaatgacgtggcttcagatgcaatttcggtaaatgagcggtcggagctctgtgaggag
gtccttcgctgtgatcatgatgcttttgagtgttcacgtccaggttctcttgaagagcgg
atctctagtgcagtttctgataagaacactaatcagaaaattgaatatagttccaatcaa
gcgcagaaagaccatatagaaactcgccagcatgaacaatctaaagcagtagatgatgta
cctttaccatctaaaaagacccgggccaagaaaaaagaaagtcagggggtgtcaacttct
gcgccgatggatcctggtgaacatcaggattctgttgtggggcgattctgtgacgttttg
gaggaattgtgtagcagggctgaaattcctggtgaagagctggaggaggctgagtggtta
caattgtccacttctgacattcgaacaattttgaaggaggtgctgtccatcagaacgcag
aatatgcttcatctggttcctgtaaatatacttgtgagactattgaaagttctagataat
cagattcatcgagctgaagggatatctatagatgaatgtgaaaattcagattcagatgtt
tccttgattttttgtgctttggagtcaatccatgctgcacttgctgtgatggtttgcaat
gacatgccaaaacaactgtataaggaggagattattgaacgaattctggagttcaccaga
cgtcaggtcatggacataatgtcagcttgtgatccttcttatcgtgctttgcatcaacct
ggtgacaatggaattgctgaaggggaagacaacccagatgatggtgctgagtatggctca
gctagcaaaaggcggcgtacgactaagagttttaaaagcaaaaggacatcaacaaacagg
atatcgactgctgtgaacacagtatgtcagaagctttgcactgtgttggggttcttgaag
gacctgttgtttatagaacgcctctcagacagttgcatcttgcagctagtgaagacgtgc
ttggcgacattacttgttgataatatccaactcttgcaaatgaaagctatgggcctcata
agtgggattttctattcatacacacaacataggagtcatgtcgttgatgaagtagttcaa
cttctctggaatctaccattctctaaacgagctgctagagcttatcatttacctgatgaa
gaacagaaacagatccaaatgattactgccttattgcttcagttggtatcccacagtgct
aaccttcctgaaactttgagacaaccatcaagtaatcgtgcaatttttgaaacgacaatt
gaatcaggttacctgattaaatgtaatgaggcggcaacagagacatgtgtttcattctgg
acacatgttcttcagcggcttacaactgttaaaagtcaagatgcatctgaggtgaaggtg
ataatggagaatcttgttctggaccttttgactaccttgaatctgccggagtaccctgct
gcatctctcattttagaagttctctgtgtcttactgcttcagaatgcaggcccaaagtcg
aaagatacatccatacgttctatggcaatagatatactcggttcaattgctgcacggtta
aagcacgactctgctcgttgccaaaaagagaatgggtggatcgtgcaggggattttaggt
agggaaaatgttaatgagggtgaacaagcagatacctgttctgtttgtttggatggtgta
atggaaaaagctttattgatatgtcatggctgtcaaaggttgttgcatcctgattgtatg
ggtgtgagagaacatgacattgcaacacgtggttggcactgccctttctgtctctgtagg
aagcaacttttagtattacattcgtattgcaaatcacagtgcaaggatgacaagacaaat
catgtacattcgccaactaccgagtcagattcaaatatggagattgttcagcagatgctt
ctgaattacctggaggataatggttcttatgatgatcttcatttgtttgctcgttggttt
tatctctgcctgtggtacaaagatgatccacaatcgcaacaagagttcagctatcgcttt
gccaggttaaagttgaaagcagttatccgggatacaggggccttgtcatcagtgctgtca
agagatttcattaaaaggataaatttgtgtttagggcagcataattcattctccagagga
tttgatacgatacttgccatgcttctggttagtctacgtgaaaactcgcctgtaattagg
gctaaggcattgcgatcagtcagtataattgtagaagctgatccagatgttctacgtgat
aaacgtgtccaatcagcagttgaaggacggttttgtgattctgcgatatctgtcagagaa
gccgctcttgaactggttggaaggcatattgcgtcacatccagatgttggtgtgcaatac
tttgacaaggttgctgagagaatcaaagatactggtgtgagtgttcgaaaacgagcgatc
aagattatcagagacatgtgtacatcaaatgctgactttgtagaaacaacccgtgcatgc
attgagattatttctcgtatcagtgatgaagagtcaagtattcaggaccttgtttgtagg
acattttacgagttctggtttgaagaaccttctgggaaacagtattttggagatgatagt
tcagtgccattggagatgacaaggaagactgaacagatagttgacatgttgaagaagatg
cctaatcatcaagctcttgtcacggttatcaaacgaaacttggctcttgattttttgcct
cagataaaaggaacaggaattagttctctggccctggcagcagtacggaagcgctgtgaa
ctaatgtgcaaatttttgctggaaagaattttgcaggtagaggaaatgaacgtagaggaa
ggagagattcggatcctaccctacattacagccttacatgccttttgtcttgttgactca
tcactttgtgctccttcttccaacccttctcagtttgtggtcacactgcaaccatatctt
aagaaccaggttgacaatcgagttgttgcacaattattggagtgtatcatctttgtaatt
gatgctgttcttcctttactccgaaagctgcctccaagtgttgttgacgagcttgagcaa
gatttgaagcagatgattgtccgtcattccttcctaacagttgtacatgcttgcatcaag
tgcctttgcagtttgaataaaattgcagggaaaggtggaaggttgatccagtttcttatt
caagtttttgttaaacgtttggatgctcttggtattgataacaaacagcaagtgggacgc
tctttgttttgccttgggcttcttatccgttatggtaactcgctattgattgcattcgat
ggaagcattgatatttctagcaaactcaatttgtttaagaagtatcttcttgcggatgat
tttggtataaaggtcagagctctgcaggcattgggatttgttttgattgctagaccggaa
tttatgttggaaaaggaggttggaaaaattttagaggctacattgtcttctagctccgat
actcgtctcaagctacaagttctgcaaaatatatatgattatctcctggaggcggaaagt
caattgggttcagatacagtaggagataatgttgctgataactcccaagatggtagctct
gttgtgcctgaggctgccggtgctggtgatactaacatttgtgggggaatagtacaattg
tattgggaaaatatcttggagagatgcttggatactaacgaacaagttcggcaatctggc
cttaagattgtggaagttgctctacgccaaggccttgttcatccaatcacatgtgtcccg
tacctaattgcactcgagacagatcccttggaggtgaattcgaagctggcacatcatctg
ctgatgaatatgaatgagaagtatccagccttctttgagagtcgtctgggtgatggcctc
caactgtcatttaactttattcgatcaatgaaaacgaattctgtgaatttaaactcaaaa
ttgcaatacaaggtagtggaaaatatgaagggaaaatctgaggatgcgtcatttgtaaat
gcaaggcttggggtttctcggatttacaagctaattcgtgcaaatcgtgtggctagaaat
aagtttatgtcctcggtcattcgcaaatttgataatcctagctggagtgcaacagttgtc
catttcttaatgtactgcacagaaattcttgctttgcttcctttcatggcacctgatgag
cctctttacttagtttactctataaatcgagttatacaagttagatcggggacattggaa
gcgagtcttaaagcttttagcactcatttctcccagcgaaatacccagaaggttgcaact
gaaaatgggagctggcagcagttggccgctgctcaactctctgttaattcaatatctttg
gagttaaatggtacttttcaattgccgggggaaggtcattttacttctcactccatggag
acagatgaaaatatgcattgcagaagcttcagattcacagaagatgatcagcagaggata
caggctgtctgtatagctgcaacggctcttcagctcctcttgaagttaaagaggcacctg
aaggttgtgtacagtttcgatgatgttcgatgccaagcgttttctcctactgagcctccc
aaagcttgtgaggccctctcccggcaaaatattccttttggcattggcgacatgtcgact
attttaccgtctactcctgaagagttgcaccagagatatcaggagttcaagaatgcttta
agggaggataccgtcgattactcagcctactcagcaaacattaagaggaagcgccctaca
ccctccaagagaggtggtagggccagacgagcaatggtcagggatgatgaggactctgat
gttgaagacgagaggaagcgtacaccctccaaaagaggtgttaaggccagccgagcaatt
aacagggatgacgaggactctgatgttgaagacgaggactgtacaggtggacggagaaat
tacggtgctcgacagagcaacggcgtcagatcaagtaggaggttttag
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