Silene latifolia (white campion): 141633492
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Entry
141633492 CDS
T11116
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03440
Homologous recombination
slaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
141633492
03460 Fanconi anemia pathway
141633492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slaf04121
]
141633492
03036 Chromosome and associated proteins [BR:
slaf03036
]
141633492
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141633492
Ubiquitin system [BR:
slaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
141633492
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
141633492
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
141633492
FA (Fanconi anemia) pathway
Downstream FA components
141633492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
TrbM
Motif
Other DBs
NCBI-GeneID:
141633492
NCBI-ProteinID:
XP_074302049
LinkDB
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Position
Y:complement(468001817..468011300)
Genome browser
AA seq
1130 aa
AA seq
DB search
MSTWQLFSDDDNNFRWKISPETTHSSQHVHLPSSPPAPLPSCHDVLLLGCSKIFEDNDES
SKSDDNNHFGNGDAGGRLPMFSTGLGNSVVLDKASIAKAASILGDDFKDNVNAGHEFISP
NSVFQMGSGKKAGGQGFVSPNSMFQTGSGKKVNISSAGLSRAKALLGMNENDGDEPPKKI
LRGGDGLRYEMPPNLGKAHMVINHGGTENGTLLKKARLHSKNEIVDQNISNLIQPGMCNP
SVKSSGFKFQTAGGRSISVSGDALQRAKNLLGDQEIGSLLDEEDAGASMFSFCKNGNSDG
GLFNKENNIGHFTLHQLEKSEQNPKIFVSPMKQSSDRKQTKAKSEALVSGTNLISKFNAE
ASLCISSGKQPCPKEPFMENHFGSEVTSQHTMANGVGSGLHRSLKQSGRPLADITNTIDT
NSTSVKGTPSEVRRLGRRTSLTPFKMPRSSKFVTPLNNNLHVIPNGYSSRMSETSFPRRK
VSMRYPPQSSRTYITEFFKEPPAYPQKLEIISSELRQINPECSEEYTFLDGSRTIDAGTF
YDMLLQSGASAQHITKKWVANHYKWIVWKLACYERLYSAKFAKKFLTSSNVLEELKYRYE
REVNHGQRSAIKRILEGDASPTSMLVLCISAIRSASEGTSSTKLTGETSMARLELTDGWY
SIDALLDPLLSKHLAVGKLFVGQKLRICGAGLNAWEGPVSPLEASATVSLVLHINGTYRA
SWDARLGLCRGAYAPLAFRCIKGNGGSVPRTLVGVTRIYPVLYRERLKNGGYIVRSEKME
TAVSQLYSQRRSNIIEGLTLDFQRGSNNSFVADDYDNEEGAKILKMLEHAAEPELMMAEM
SSEQLTSFSIYRAKAEENRQCDLQKLIEKAIEDAGLSGREVSPFMRVRVVGLQCKDHAKI
KDFREGLITIWNPSERQKLELEEGQTYAISGLLPLHSDSNTLYLQARGSSTKWQPLKTIE
NKSFMPFFNPRKALSLSRMGEVPLSSEFDTAVFVVHVGLEHVDGLQKKQWVFVTDGSLSE
LRTDDSTMPLLAISFCSPCTDDDSTSPINYNLVGSIVCFCNLVKRAKDHANHMWVAEATE
NSTYYLNYEHPSCSHVKDAFGLVKKWEQNSSLTIEKLKKRVLYIIGDNAP
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagttattctccgacgacgacaataattttcggtggaaaatatcgccg
gagacgacacattcgtcgcaacatgtccaccttccgtcttctcctcctgctccattgcct
tcatgtcacgatgtcctccttttaggatgttcgaagatttttgaggataatgatgaaagt
agtaagagcgatgacaataatcactttggtaatggtgatgctggtggtcgtcttcccatg
tttagtactggattggggaattcagttgtgcttgataaagcttccattgccaaagctgct
tcgattcttggtgacgattttaaggataatgtcaatgcaggacatgagttcatttctcct
aattcagttttccaaatgggatctgggaaaaaagccggaggtcaaggcttcgtatctcct
aattccatgtttcaaacaggctctggaaaaaaggttaacatttcttctgcggggctttct
agagccaaggcgttgttgggtatgaatgaaaatgatggtgatgaacctccaaaaaagata
ctacgtggtggtgatggattgagatatgaaatgccaccgaatttagggaaggcacatatg
gttatcaatcacggcggaactgagaatggtacactattaaaaaaggctcgtcttcactca
aagaatgagattgttgatcagaatattagtaatcttatacaacctggaatgtgcaaccct
tctgtaaaatcttctggattcaagttccaaactgctggcggtaggtctatttctgtgtct
ggtgatgcattgcagcgcgcaaaaaacctccttggtgatcaagagattggtagtttatta
gatgaagaagatgcaggtgcttccatgttttcattttgcaagaatggtaattcggatggg
ggcctctttaacaaagagaacaatattggtcatttcactcttcatcaacttgaaaaaagc
gagcaaaatcctaagatctttgtatcgccaatgaaacagtcttctgacaggaagcaaacc
aaagccaaatcagaggcattggtttcagggaccaatttaatatcaaaatttaatgctgag
gcaagcctctgcatttctagtggtaaacaaccatgtccaaaagaaccttttatggaaaat
cattttggcagtgaagtaacaagccagcataccatggcaaatggtgtgggctccggtctt
cataggtctctaaagcaatcaggaagaccacttgctgatatcacaaacaccattgacact
aattctacaagcgtcaaaggaacaccatctgaggttaggagacttggaagaagaacttcc
cttactcctttcaagatgccacgaagctcaaagtttgttactcctctaaacaataacctc
cacgttatcccaaatgggtactcgagcagaatgtctgaaacttcatttcctcgaaggaag
gtttctatgcgttacccacctcagtcttcaagaacttacatcaccgagttttttaaagaa
cctccagcatacccacaaaaactagaaattatttcttcggagctacgacagattaatcca
gaatgttcagaggaatacacatttttggatggatcccgcacaattgatgctggcactttc
tatgatatgctgctccaatctggagcatcagctcaacatatcacaaaaaagtgggtagca
aatcactacaagtggattgtgtggaaactagcatgttatgaaagattatattcagctaag
tttgcgaagaaatttctcactagttctaatgtgcttgaggaattaaagtacagatatgaa
cgagaagttaatcatggtcaacgttctgcaattaagagaattttagaaggagatgcgtca
cctacttccatgctagtgttatgcatttcagctatccgatcagctagtgagggaacttca
agtacaaaattgactggagagacaagcatggcaagattggaacttacagatggatggtat
tctatagatgccctgttggatccactgctgtccaaacacctagctgttggaaagctattt
gttgggcaaaaactgcggatatgtggggctggattaaatgcctgggaaggacctgtttct
cctcttgaggcgtctgcaaccgttagtttggtgcttcatataaatggaacttacagagct
agctgggatgcacgtttaggattgtgtagaggtgcctatgcaccactggcatttagatgc
atcaagggcaatggaggctcagtacctaggaccttagttggagttaccaggatatatcct
gtcctttacagagaaaggttgaagaatggaggatatattgtgaggtcagagaaaatggaa
accgcagtctcacagctttatagccagaggcgttctaacatcatagaaggtcttacatta
gactttcagagaggttccaataatagttttgtggccgatgattatgacaacgaagaaggg
gcaaagatcttgaagatgcttgagcatgctgctgagccagaacttatgatggcagaaatg
agttctgagcagctaacatcgttttccatttaccgtgcaaaagctgaggaaaacaggcag
tgcgacttgcaaaagttgatcgaaaaagccattgaagatgcaggactaagtggcagagaa
gtctccccatttatgcgtgtaagggtcgttggactacaatgtaaagaccatgctaaaatt
aaagacttcagggaaggattaataacaatctggaacccttctgaaaggcagaaacttgag
cttgaagaggggcaaacttatgctatttcgggcctcttaccgttgcattctgattcaaac
acactttatctacaagccagaggatctagtactaaatggcagcctttaaaaacgatagag
aacaaatcttttatgcccttcttcaatcctcgcaaggctctttcattatcaagaatggga
gaagttccactgtcaagtgaatttgatacagctgtgtttgtcgtgcacgtgggcctggaa
catgttgatggtctccaaaagaaacagtgggtgtttgttactgatggatccttgagtgag
ttaagaactgatgattcaacaatgccattgctggccattagcttttgctctccgtgcact
gatgacgattcaacatctccaatcaactataatcttgttggatctatcgtctgcttttgt
aatcttgtgaagagagctaaagatcacgcgaatcatatgtgggttgcggaagctactgaa
aattcgacatattaccttaattatgagcatccttcttgttcccatgttaaagatgccttt
ggcttagtcaagaaatgggagcagaattccagtttgacaattgagaagctaaagaagagg
gtcctatatataattggtgataatgctccctga
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