KEGG   Silene latifolia (white campion): 141633587
Entry
141633587         CDS       T11116                                 
Name
(RefSeq) histone deacetylase 19-like isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03082  ATP-dependent chromatin remodeling
slaf03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    141633587
   03083 Polycomb repressive complex
    141633587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:slaf03036]
    141633587
Enzymes [BR:slaf01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     141633587
Chromosome and associated proteins [BR:slaf03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     141633587
   HDAC complexes
    Sin3A-HDAC complex
     141633587
    BRAF-HDAC complex
     141633587
    REST complex
     141633587
    SHIP complex
     141633587
    MiDAC complex
     141633587
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     141633587
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    141633587
  Chromatin remodeling factors
   NuRD complex
    141633587
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 141633587
NCBI-ProteinID: XP_074302129
LinkDB
Position
Y:complement(485227716..485238162)
AA seq 523 aa
MDIGGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM
QVFKPVPARDRDLCRFHADDYVAFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQ
TYAGGSVGGAVKLNHGYCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKSHQRVL
YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDG
IDDDSYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSF
NVPLLLVGGGGYTIRNVARCWCYETGVALGMELDDSMPQHEYFEYFGPDYTLHVAPSNME
NKNSRPMLEEIRSKLLDYLSKLQHAPSVAFMDRPPENELPEEDEDQQDPDQRWDPDSEME
VDDDRPISIRSRVKREIMEPGLKDPEDVKEPVEHARDMDISFITGNTALKAPTLGLDHPD
TSVKMEHDNSSKLPDQAADMNSYLRPQGHILWMMVLTVSVLVA
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggacataggcggtggtaattcgttaccatctggaccggatggggtgaagcgtaaagta
tcatatttttatgatccagaagtcggaaactattactatggacaaggtcaccctatgaag
ccacatagaattcgtatgacacatgcccttttagctcactacgggctgcttcaacatatg
caagtgtttaagcctgtccctgctagagatagagatctttgtagattccatgccgatgat
tatgtggccttccttaggagcattaccccagaaacccaacaagatcaattgaggcaatta
aagagatttaatgttggagaagattgccctgtgtttgatgggctttactctttttgtcaa
acttacgctggaggttcagttggtggtgctgtgaaactgaatcatgggtattgtgacatt
gctatcaattgggctggtggcttgcaccacgcaaaaaagtgtgaggcatctggtttctgc
tacgtgaacgacattgtattggcaattttggaacttcttaagtcgcaccagcgagtctta
tatgtggatattgatatccatcatggtgatggtgtggaagaggccttttatactacagat
agggtcatgacagtgtctttccacaagtttggggattactttcctggtacaggagacatc
agagatattggttatggaaaggggaaatactattctctcaatgtgccactagatgatggg
attgatgatgacagctaccagtccctattcaagcctatcatgggaaaagtgatggaggtt
tttaagcctggggctgtggttctgcagtgtggtgctgattctttgtcaggtgatagattg
gggtgtttcaacctctccatcagaggtcatgcagagtgtgtcaagtatatgaggtccttc
aatgtcccactattgttggtcggtggtggtggatacaccataagaaatgtggcacgctgc
tggtgttatgagactggggttgctttaggtatggagcttgatgatagtatgccacaacat
gagtattttgagtattttggtcctgactatactctccacgttgctccaagtaacatggaa
aacaagaactcacgaccaatgttggaagaaattagatcaaagcttctagattacctctca
aaactacaacatgctccaagcgtcgcgtttatggaccgtccacctgaaaatgagcttccg
gaggaagatgaagatcagcaagatccagatcaaagatgggatccggactctgaaatggaa
gttgatgatgaccgtccgatttctatccgaagccgagtaaagagagagatcatggagcct
ggccttaaagatcctgaggatgtgaaagaacccgtggaacatgctagagacatggatatt
tctttcatcacagggaataccgctttgaaggctccaaccttaggattagatcatccagac
acttctgtgaaaatggagcacgacaactcgagcaagcttcctgatcaagcagctgatatg
aactcatatctcaggcctcagggtcatattctctggatgatggtactcacagtttcagtt
ctagtggcctag

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