Silene latifolia (white campion): 141634060
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Entry
141634060 CDS
T11116
Name
(RefSeq) actin-interacting protein 1-1-like
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
slaf04990
]
141634060
Domain-containing proteins not elsewhere classified [BR:
slaf04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
141634060
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
141634060
NCBI-ProteinID:
XP_074302469
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Position
Y:220145628..220154854
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AA seq
610 aa
AA seq
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MASLSETYACVPSTERGRGILISGDPKSNNILYCNGRSVIIRSLDNPQKVEVYGEHAYPV
SVARYSPNAEWIASADVSGTVRIWGTHNGFVLKNEFKVLSGRIDDLQWSPDMLRIVASGD
GKGKSFVRAFMWDSGSTVGDFDGHSKRVLSCAFKPTRPYRIVTCGEDFLINFYEGPPFKF
KHSIREHLNFVNCVRFSPDGSKFITVSSDKKGIVYEGKTGDKIGELSSEDGHQGSVYAVS
WSPDSKKVLTVSADKSAKVWEISQEGHGTIIKTLTCPESGGIDDMLVGCLWQNDSLFTVS
LGGSINIFSASDLEKDPVTLSGHIKNVSSLSVLKNDENTVLSCSYDGVIAKWIRGVGYSG
KINMKHHAPIKCFAAVEGELILSGFDNKVWRAPFHAGECAAAEHVDVGYQPKDLSVALHN
PQIVLVATDTGAVMLSGLKILSSINLGFAVTASAISPDGSEAILGGQDGKLRIYSISGDT
LSEEAVLEKHRGAITVIRYSPDVSMFASGDANREAVVWDRSTREVKLNNMLYHTARINCL
AWSPDCTLVATGSLDTCVIIYELGKPASARRTIKSAHLGGVYDVDFSDECSILSSGEDGC
VRLWTIVPEC
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttatcggaaacctatgcctgcgttccgtcaacggaacgcgggcgtgggatc
ctcatctcaggcgaccccaaatcgaacaacattctgtactgcaacggccgttccgtcatc
atccggagcctggacaatccgcagaaggtggaggtgtacggtgagcacgcctacccggtg
tcggtcgcccgttattcgcctaatgcggaatggatcgcatccgctgatgtgtccgggact
gtccggatctgggggacccacaatgggtttgttcttaagaatgagtttaaggttctttct
ggtcggattgatgatcttcagtggtcccctgatatgcttcgcattgttgcttctggtgat
ggcaagggcaaatcttttgtcagagcttttatgtgggattctggatctactgttggagac
tttgatggtcactcaaaacgggttttgagttgtgcattcaaaccaacaagaccataccgt
atcgttacttgtggcgaggactttctgatcaatttttatgaagggccacctttcaagttt
aagcattccataagggagcacttaaactttgtcaactgtgtgaggttctcaccagatgga
agcaagttcatcactgttagttcagataaaaaaggtatagtttatgaaggaaaaacagga
gacaaaattggagagctgtcctcagaggatggtcatcaaggaagtgtttacgctgtgagc
tggagcccagatagtaaaaaggtccttactgtatctgctgataaatctgctaaagtgtgg
gaaatttcacaagaaggccatgggacaatcataaaaacactaacctgccctgaatctggt
gggatagacgatatgttggttggatgtctttggcagaatgacagcttatttactgtttca
cttggcggttccataaacatattttctgcaagtgacttggagaaggaccctgttacgctc
tctggacatattaagaatgtctcttccttgagtgtgctgaagaatgatgaaaacacggtg
ctatcctgcagctatgatggtgtaattgctaaatggattcgtggtgttggatattctggc
aaaattaatatgaagcatcatgcaccaataaaatgttttgctgctgtggaaggcgagctc
atcttatctgggtttgataataaggtttggagagctccttttcatgctggcgaatgtgca
gctgcggagcatgtggatgttggatatcaaccaaaggacttgagtgttgctcttcacaac
cctcaaattgtcttagttgctactgacactggagctgtaatgcttagtggtttgaaaatt
ttgtcaagcattaaccttggatttgctgtgacagcatctgctatttctcctgatgggtcg
gaagcaatattgggtgggcaagatggtaaattgcgcatatattctatttccggcgatact
ttgtcagaagaggcagttcttgagaagcatcgtggtgcaataactgtaatacgttattct
ccagatgtctctatgtttgcgtcaggtgatgccaaccgtgaggctgttgtttgggatcgt
tccacccgagaggtaaaacttaacaacatgctgtaccatactgcccgtataaactgcttg
gcatggtcccctgactgcactttggttgcaactggctcccttgatacatgcgtcataatc
tatgaacttggaaagcctgcttccgctaggagaaccattaagtctgctcacttaggtgga
gtatatgatgtggatttctctgatgagtgcagcattcttagttccggagaggatggttgt
gtccgtctctggacaatagtcccagagtgttag
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