Silene latifolia (white campion): 141637565
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Entry
141637565 CDS
T11116
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic-like isoform X1
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00730
Thiamine metabolism
slaf01100
Metabolic pathways
slaf01240
Biosynthesis of cofactors
Module
slaf_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
141637565
Enzymes [BR:
slaf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
141637565
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
141637565
NCBI-ProteinID:
XP_074303167
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All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MALIQATLTTIRCKNDNHSAQSLLPKTSFLPRTDMLGQATGAFSKEFNPAALSAVPQATL
TFDPPTTNTGKDKQRKHTVDPSAPDFLPLPSFEQCFPKSTKECREVIHEESGHVLKVPFR
RIHLSGDDPHFDTYDTSGPQNISPRIGLPKLRKDWIDRREKMGYPRYTQMFYAKQGIITE
EMLYCAARENLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVVS
SIEEEVHKLQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIA
EDLNWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYH
RENFAYEHWDDILDICNQYDIALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWKKD
VQVMNEGPGHIPLHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGA
LGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKCHPQAQSWDDALSKARFEF
RWMDQFALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYG
NAEEAIREGMEAMSAQFLAAKKTISGEQHGEAGGEIYLPQSYMESLKR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaattcaagctactttgacaaccataaggtgcaagaatgacaaccattctgca
caatctctactgccgaaaacttctttcttgccaagaactgatatgcttgggcaggctact
ggtgcttttagcaaagaatttaatcctgctgccttaagtgcagtccctcaggccacatta
accttcgatccaccgactaccaacactggcaaagataaacaacggaagcatacagttgat
ccttctgcacctgactttcttcctcttccttcctttgagcaatgtttccctaaaagcaca
aaagaatgcagggaagtgatccacgaagaatcgggtcacgtactcaaggtaccctttaga
cgcatccacctatctggggatgatcctcactttgatacctatgacaccagtggccctcaa
aatattagcccacgcatcggacttcccaagctacgcaaggattggattgacaggagggag
aaaatgggatatcctcggtacactcaaatgttctatgcaaagcaaggaatcataactgaa
gagatgctgtattgcgctgctcgtgagaaccttgatcctgagtttgtgaggtctgaggtt
gctcgtggacgtgcaattataccttccaacaaaaagcatttggagttggagccgatgata
gtcggaagaaactttcttgtcaaagtcaatgccaacattggaaattcagctgttgttagt
tcaattgaagaggaagtccacaaacttcagtgggcaacaatgtggggagctgacacgatc
atggatctttcaacaggtcggcatatccacgagacccgtgagtggatcctccgtaactca
gctgttccagttggcacagtgcctatttatcaagcacttgaaaaggtgaatggaattgct
gaagatctcaactgggaggtcttcagggaaactttgatcgaacaagctgagcaaggtgtc
gattactttactattcatgctggtgttctactaaggtacatccctcttacagctaaacgt
atgaccgggattgtctctcgtggaggatccatccatgcaaagtggtgcttagcttatcat
agggagaattttgcttatgagcattgggatgatattcttgatatctgcaaccaatatgac
atagcattatccatcggagatggactcagacctggctcgatctatgatgccaatgatact
gctcagtttgctgagctcttgacccaaggagaacttactcgacgagcctggaaaaaggat
gtgcaggtgatgaatgaagggccaggacacattccgctgcacaagattcccgaaaacatg
caaaaacagctagaatggtgtaatgaagcacctttctacacacttggtcctttgactact
gatatcgcccctggttacgatcacataacctcagctatcggggctgccaatatcggagct
cttggaactgctcttttatgttacgttactcccaaggaacatcttggtttgccaaaccga
gatgatgtaaaagcaggtgtaatagcatacaaaattgctgctcatgctgctgatctggcc
aaatgtcacccacaggctcaatcatgggatgatgcattgagcaaagcgagatttgaattc
cggtggatggaccagtttgccctttctcttgatcctatgactgctatgtctttccatgac
gagactttaccctcggaaggggccaaggtagctcatttctgctccatgtgcggcccaaag
ttctgctctatgaagataacagaggatgtgcgcaagtatgctgaggagcatggttatgga
aatgccgaagaagctatcagggaaggaatggaagcaatgagcgctcagtttcttgctgct
aagaaaactattagcggagaacagcatggtgaagctggcggagagatctacttgccccaa
agttacatggaatcattgaaaaggtag
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