Silene latifolia (white campion): 141637791
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Entry
141637791 CDS
T11116
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00730
Thiamine metabolism
slaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
141637791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141637791
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
141637791
Ribosome biogenesis [BR:
slaf03009
]
Prokaryotic type
GTPases
141637791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
nSTAND1
AAA_29
AAA_21
AAA_23
AAA_16
AAA_22
SMC_N
AAA_28
eIF-1a
AAA_15
Guanylate_kin
IstB_IS21
AAA_7
AAA_30
Septin
IIGP
Roc
Motif
Other DBs
NCBI-GeneID:
141637791
NCBI-ProteinID:
XP_074303309
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MPVVSFSLLRPYAPPSTAAYLLILRRKFSHLVTTTASRRNHLNHQQQQPRPNKHLTSRDL
SRAKHQHLKNITTLTPPPIAAGAADKVVGKVTSAQANFMRVVVEGEHSRSVEKGVEGSNN
GGGVELLCVVRAVLKKIKRRVLVGDKVLVGSIDWNDGRGMIENVFPRDSEVLDPPIANAD
HFLVLFSMKQPKIEPFSLTRFLIEAESTGIPLTLALNKCELVGEEVLVEWKSRLRRWGYM
PIFCSVQSKRGLDSLAFILRDRTTVIVGPSGVGKSSVINALRNTSNSPSVTDEIAGSKAR
LEDQRVGEVSARSGRGKHTTRHVSLLPLAGGGYLADTPGFNQPSLLKVTKHSLAQAFPEI
QKMHEENEPKTCAFKNCLHIGEPGCVVAREWERYPYYLQLLDEIKIREEFQLRTLGTKRE
GDVRNKMGDMGVMVAEPRLEPKKHRRVSRKKMNQSILDDLDEVDDEEDESLKDNPIIQAM
EEENQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggtttcattttcactactccggccgtacgcgccaccgtctacggcggcatac
ctccttatcctccgccgtaagttctcacacctagtcactaccaccgcttccagaagaaac
cacctcaatcaccaacaacaacaacctcgtcctaacaaacacctcacctcacgtgacctc
tcacgtgccaaacatcagcacctcaaaaacatcaccacactcactcctcctccaatcgcc
gccggagccgccgataaggtcgtcggaaaggtgacttcagcacaggcgaacttcatgcgc
gtcgtcgtcgaaggcgaacactctagaagcgtcgagaaaggtgtagaaggttcgaataat
ggcggcggagtggagttactgtgtgtagtgagagcagttttgaagaagattaagagacga
gttttagtaggcgataaggttttagtaggaagtattgattggaatgacggtagaggaatg
attgagaatgtttttccgagagattctgaggttttggatcctccgattgcgaatgccgat
cattttttagtgttgttttctatgaaacagccgaagattgagccgttttctttaactagg
tttttgattgaagctgaatctactggaattccgcttacgcttgcgctaaacaaatgcgaa
cttgttggtgaagaggttctagttgagtggaaatctaggcttcgtcgttggggttacatg
cccatcttttgcagtgttcagtccaaacgcggccttgattctcttgcattcatcttgaga
gaccgtacaactgtcatagtgggacctagtggtgttggcaaatctagcgtgatcaatgca
ttgagaaacaccagcaattctcctagtgtcacagatgagattgcaggtagcaaagccagg
cttgaggaccagcgagttggggaagtgtctgctagaagtggaagagggaagcatacaact
cggcatgtttctttgcttcctttggctggtggaggttacttagctgatacgccagggttc
aatcagcctagtctactgaaagtaactaagcactctcttgcgcaggcattccctgagatc
caaaaaatgcatgaagaaaatgaaccaaagacttgtgcattcaaaaattgcttgcatatt
ggagaacctgggtgtgtggtggcaagggaatgggagaggtacccgtattacttgcagtta
ctagatgaaatcaagatacgtgaggagtttcagctaaggacattgggcacaaagcgagag
ggcgatgtgaggaacaagatgggtgatatgggtgtcatggtggcggagccaagactggag
ccaaagaaacacagaagggtgtctcggaaaaagatgaaccagtcaatactagatgatttg
gatgaggtggatgacgaggaagatgaatctctgaaggataatcccatcatacaagcaatg
gaagaagaaaaccagtga
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