Silene latifolia (white campion): 141637986
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Entry
141637986 CDS
T11116
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141637986
Spliceosome [BR:
slaf03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
141637986
Other components
Complex C specific factors
141637986
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Arm-DNA-bind_4
TseH
WEF-hand
Motif
Other DBs
NCBI-GeneID:
141637986
NCBI-ProteinID:
XP_074303522
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MDEYQEMEKFGLDKDFEGGQFIGGEFYYKKRKDKAVQSRDDVLYGVFASGSSDSDDYDDD
DGKRKKRKKGGFVKKADYSKPVNFISIGAVAPTEEAEKEEKNEGFTPNGLGSGLGFAPSG
SGAGVGSGGLGLGFGGKGLGMEEGEEKVEVEDEEAFLPTAFGKKIKEAAEKRREKAKISE
GSASGKSKLGEARRGVEPSGDGVGGFEAHTKGIGWKLLKEMGYKGGGLGRNAQGIVAPIE
AKLRPKNMGMGFNDYEESKSVPKVVDISQQIEAKAKSVSVKKPENLWKKQARTRNKERGN
IITPDELLAMKAEAEGPPLVLQKVVDMRGPQVRVLTNLENLNAEEKARDSDVPMPELQHN
IRLLVDLIELDIQKLDKDLSNQKESVVVLQMEKEMLQKKATQEKKQIDNMEEILKILDTV
EEEHISGRLTLEILAKFVAELQRMYVQEYKICNLSSIACSYALPLLIRVFQGWDPLQNPS
YGVDVITLWKSLLQEDEQHEIFEDAAAPYSQLVNEVVFPAVRIAGINTWQARDPEPMLRF
LELWEKLLPSSVLQSLLDMIVMPKLSEAVKSWDPLRETIPIHVWIHPWLPLLGQKLESLY
QAIRVTLGNALQHWHPGDTSAYTILSPWKTVFDAASWEQLIFRSILPKLITVMQEFQVNP
ANQKLDQFYAVMAWASAVPIHHMVSLLEIHFFSKWHQVLYHWLCSSPNFEEVMQWYLGWK
ELIPSELLANERVRHQLNVGLDMMNRAVEGLEVVQPGVKENISFLRAREQRQFEAQIKAG
LAQQQAAAADGVPEMSLKEVIEAYAQEHGLLFTPKPGRLHNHHQVYSFGSVSVVVDSLNQ
KVLAQVQGQWSLVSLEQLVQMQNIPGPRRR
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtatcaggagatggaaaagtttgggttagataaggattttgaaggagggcag
tttataggaggtgaattttattacaaaaagcgaaaagataaagcggttcaatctagagat
gatgttctctatggtgtttttgcatcgggtagttctgattcagatgattatgatgatgat
gatggcaaaaggaagaagagaaagaagggtggttttgttaaaaaggcggattattcgaaa
cctgttaatttcatttctattggtgctgttgcgcctactgaggaggcggaaaaagaggaa
aagaatgagggttttactcctaatggtttgggttctgggctagggtttgctcctagtggt
tcgggtgctggagtggggtctggcgggttagggttagggtttgggggcaaggggttaggg
atggaggagggggaggagaaggttgaggttgaggatgaggaggcgtttttgcctacggct
tttgggaagaagattaaggaagctgcggagaaaaggagggagaaggcgaagataagtgag
ggtagtgcaagtgggaagtcaaaattaggagaggcgaggagaggggttgaaccgtcgggg
gatggggtcgggggatttgaggcgcatacaaaaggtattgggtggaagttgcttaaggaa
atggggtataagggtggtggattaggaaggaatgcacaaggtattgttgccccaattgag
gcaaagttaaggccgaagaatatggggatgggttttaacgactacgaggagagcaagagc
gtgccgaaagtggttgatatatctcaacagattgaagcaaaggcaaagtcagtttcggtt
aagaagccggaaaatctttggaagaagcaagctcgtacgcgtaataaggagaggggaaat
ataattaccccagacgagttgctggctatgaaggcagaggcagaaggaccaccattggtg
cttcaaaaggtagttgatatgagaggtccccaggttcgagttttgacgaatctagaaaac
ctgaatgccgaggagaaggctagggacagtgatgtacccatgcctgagctgcagcacaac
atcagattgctagtggacttaatagagcttgatatacaaaagttagacaaggatttgagt
aatcagaaggagtctgtagtcgtgcttcagatggagaaggaaatgctccaaaagaaggca
acacaggaaaagaagcaaatcgataacatggaagaaattttgaagattttggatactgtt
gaggaggagcatatttcaggaagattaactttggaaattcttgcgaagtttgtggcagaa
ttgcagaggatgtatgtccaggagtacaagatatgtaacttgtctagtatcgcatgttca
tatgcacttcctttgttgattcgagtgttccaaggatgggatcctctccaaaacccatca
tatggagttgatgtaataacattgtggaagagcttgttacaagaagatgaacaacatgag
atatttgaggatgcagctgccccttattctcagttggtcaatgaagttgtgtttcctgca
gtcagaattgctggtataaacacatggcaagctagagatccggaacctatgcttcgattc
ctcgagttatgggaaaagttgctaccatcgtcagttcttcagtctctacttgatatgatt
gtgatgccaaagttatctgaagctgtaaaatcctgggaccctcttcgggaaacgattcca
attcatgtttggattcatccttggcttccgctacttggacagaaattggaaagtctctat
caggccatccgtgtgacattaggaaatgccctccaacattggcaccccggtgatacgtcc
gcctacaccattctatcaccctggaagacagtatttgatgctgccagttgggaacaactt
attttcaggtccattcttcctaaattgataactgttatgcaggaattccaggttaatcct
gcgaatcagaagcttgatcagttttatgctgtcatggcatgggcttcggctgtgcccatt
catcacatggtcagcttgttggagattcacttcttcagcaaatggcatcaagttctatat
cattggctatgttcgagtccgaactttgaggaggttatgcaatggtatcttggatggaaa
gagcttatcccatctgaacttttggctaatgagcgtgtccgtcaccaactcaatgttggc
cttgatatgatgaaccgtgctgtggaaggcttggaggtggtgcagcctggcgtgaaagaa
aacataagcttcctaagggcccgtgagcagagacaatttgaggctcagataaaagccgga
cttgctcaacagcaagctgctgctgcagatggtgtgcctgaaatgagcttgaaggaagtt
atagaggcttatgcgcaggagcatgggttgttgtttacacccaaacctggaagattacac
aatcatcatcaagtatacagctttggaagcgtgagtgtagtcgtggactctttaaatcag
aaggtcttagcacaagtccagggacaatggtctttggtatctcttgagcagcttgtacag
atgcagaacattcctggacccagaaggcgctga
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