Silene latifolia (white campion): 141639100
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Entry
141639100 CDS
T11116
Name
(RefSeq) putative WD repeat-containing protein C3D6.12
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141639100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141639100
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
141639100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Utp12
Beta-prop_WDR75_1st
Beta-prop_EML
DSE1_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_VPS8
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_TEP1_C
ASA1
Beta-prop_WDR41
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WDR54
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_LRRK2
PROPPIN
Beta-prop_RIG_1st
KNTC1_N
Utp13
DUF5711
Motif
Other DBs
NCBI-GeneID:
141639100
NCBI-ProteinID:
XP_074304386
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MVKSYLRYEQREVLGVIASGESNISYDNSGKFLLSPALDKVGIWHVRQGICSKYLSPSSS
SPGPSLGVTALATSPSSLVAVGYADGSIRLWDLDKGTCETTLNGHKGAVTALVFNKNGST
LASGSQENDIILWDVVGETGLYRLRGHRDQVTDLLFLDSGKKLVSSSKDKFLRVWDLETQ
YCMQIVSGHHSEIWSIACDPEEKFLVTGSADPELRVYTIVKSDQESEPSEDTRNPDESVN
NGLPLAVNKWEVLKPYGEVERETKDRVATLRFNKSGNFLACHVAGKMVEIFRVLDEAESK
QKAKRRLKRKKEKTEKKKKGSENGDDNHATQGENILTIIPSDIFKQFQILRAKKKICSIS
FCPTNLKNSLGTLAISLNNNSIEIYSIEEIIKESVEESVEESVEESDSNRRTQAIELEDR
RSVVTRTQVVRPTQAIELAGHRSVVRSLCLSPDNSLLLSTTHNAVKIWNPSTGNSLRTID
SEYGLCSMFVPVNSSNKSASNKYALVGTKAGNVEIIDVASATCVEVVKAHGGDLRSIAAI
PNESGPVGFVTGSTDRDVKFWEYRKLKNSGEATEKLTISNVRTMTMSDEVVKIAISPDAK
YIAVALQDSNVKVFYLDTLKPYLTLYGHKMPVLCMDVSSDGDLIVTGSSDKNLKIWGLDF
GDCHKSIFAHAASVMDVKFVPNTHYVFSVGNDRLVKFWDADKFELLLTLEGHHAEVWCLA
ISSRGDFVVTGSKDKSIRRWDRTDEPFFIEEEKEKRLEEMFEADLDGAFENKYGPKEELP
EEGAVAAAGKKTQETLTATDLIIDALDMADAEVLRITEHEKEKTIGKVSKFVPNMLLLGL
TPSDYVLRSLSKVQTSDLEQTLLALPFSDALKLLSYLKNWRTNIEKIELICRVAIILVQT
HHHQLISTPSARPLLSDLKDVLHAKAKECKDTIGFNLAAMNHLSQLRAMKNDAPFRDAKS
KLLEVRSKRARLGESRTETRGERKKKKKQKLGSDGHARSVVAL
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagtcgtacctgcggtatgaacaaagggaagtgttgggagtgatagcatcagga
gagtccaacataagctatgataactctggcaagttccttctgtctcctgctcttgacaag
gttggtatttggcatgttcgtcaaggcatttgctccaaatatctctctccttcttcctct
tctcctggaccgtctcttggcgttaccgctctagccacttccccatcttccctggttgct
gttggctatgcagatggaagtataagactatgggatttagataaagggacttgtgaaaca
acactgaatggccacaaaggagcagtgacggctcttgttttcaataaaaatggttccact
ctagcctctggcagccaagagaatgacattatcctctgggacgttgttggtgaaaccggt
ctttaccgtcttcgtggtcaccgcgatcaggtcacagatttgctcttcttggattctggc
aagaaattagttagctcctctaaggacaagtttttacgagtttgggatcttgagacacaa
tactgtatgcaaattgtaagtggtcatcacagcgagatttggtcaattgcctgtgatcca
gaggagaaatttttggtaaccggttcagcagaccctgagcttcgggtttacactatagta
aaatctgatcaggaaagtgagccatctgaagatactcgtaaccctgatgaatctgtaaat
aacggacttccattggctgttaataaatgggaagtcttgaagccctatggtgaagttgag
agagagacaaaagacagagttgctacgttaagatttaacaagtctggtaattttctggcc
tgtcatgtggcagggaagatggtcgagatatttcgtgtactagatgaggctgagtccaag
caaaaggctaagcgcagacttaagaggaaaaaagagaagacagagaagaagaaaaagggt
tccgagaatggagatgacaatcatgctacacaaggagaaaacattctcactattatacct
tctgatatattcaagcaatttcagatcctgagagctaagaagaagatatgttcaatttcc
ttctgccccactaatctgaagaattctttggggacattagccatctcattgaacaataat
tcaatagaaatttattcgatagaagaaattataaaagaaagtgtggaagaaagtgtagaa
gaaagtgtagaagaaagtgactcaaataggcgaacacaagctattgagctcgaagatcgc
cgatctgttgtgacgcgaacacaagttgtgaggccaacacaagctattgagctcgcaggt
caccgatctgttgtgagaagtctctgtctaagccctgataactctcttttattgtctacc
actcataatgcagtcaagatttggaacccgagtacaggcaacagtctccggactattgat
tctgaatatgggctgtgcagtatgtttgttcccgttaattctagcaacaagtctgccagc
aacaagtatgcactagttggaaccaaagctggaaatgttgaaattattgatgttgctagt
gccacttgtgtggaagtagtgaaggctcatggaggtgatttaaggtcaattgcagctatt
ccaaacgaaagtggcccagttggctttgtgacgggaagcacagaccgcgatgttaagttt
tgggaatatcggaaactgaaaaactctggtgaggccacggagaaactaacaatatcaaat
gtgaggacaatgactatgagtgacgaagttgttaagattgctataagtccagatgcgaaa
tatattgccgttgcgttgcaggatagtaatgtgaaggtcttctatttggataccctcaaa
ccttatcttacgctatatggtcacaagatgcccgttctgtgtatggatgtatcatctgat
ggagacttgattgttactggttcttcagacaaaaatttgaagatttggggtttagacttc
ggtgactgccataaatccatatttgctcatgctgcgagtgtcatggatgtgaagtttgtt
ccaaatactcactacgtgtttagtgttgggaatgatcggcttgtgaagttttgggacgcc
gataaatttgagttgcttttgactcttgaagggcatcatgctgaggtatggtgtcttgca
atcagcagccgtggtgattttgttgtcacaggatcaaaggacaagtccatacgtcgttgg
gatagaaccgatgaaccctttttcattgaggaagagaaagaaaaaaggttggaggagatg
tttgaggcagatcttgatggtgcatttgaaaataaatatggcccaaaggaagaacttcct
gaggaaggtgctgttgcggcagctggaaagaaaacacaagaaacattaactgcaactgac
ttaattattgatgcattggacatggctgatgctgaagttctgcgtattactgaacacgag
aaggagaaaacaataggcaaagtctctaagttcgtgcctaatatgcttctgcttgggctc
acaccctctgattatgtacttcgttcgctttccaaagttcagactagtgacctggaacag
acgttacttgcattaccattctcagatgctctaaagctgctttcttatttgaaaaattgg
agaacaaatattgaaaagattgaactcatctgcagagttgcaataatattagttcagaca
catcatcatcagttgattagcacaccttcagctagacctctcttgagtgatctgaaagat
gtcctgcatgcaaaagcaaaggaatgcaaagatactattgggtttaaccttgctgccatg
aatcatctctcgcaattaagagctatgaaaaatgatgcaccttttcgagatgctaaatca
aaattgctcgaggtccgttcaaagcgcgcgagactgggtgaaagtcgaacagaaacgaga
ggggaacgaaagaaaaagaaaaagcagaaattaggaagtgatggacatgctcggtctgtc
gttgctttatag
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integrated database retrieval system
