Silene latifolia (white campion): 141639294
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Entry
141639294 CDS
T11116
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141639294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141639294
Spliceosome [BR:
slaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141639294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
141639294
NCBI-ProteinID:
XP_074304556
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All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MAGQDASNNVEIDPEYEVIVGCNALSVDIEDQIMRTYNLIRDNYRLKFPELESIVHHPID
YARIVKKIGNESDISLVDLEGLLRPPIIMVVSITASTTSGKPLPDDVLHKTLEACDRALD
LDSARKKLVDFLETRMFYIAPNLSELVGSGVAAKLMVSAGGLGSLAKMPACNVQLVGAQT
NNLAGFSCQYHHHIGYLEQTEIFRSTPPGPALRKRVCRLLAAKSTLVARVDYTRGDPTGK
MGRALRQDIHNKIDKWQQLPPPKIVKPLLLPNLVPKKKRGGPRLRKMKERYAVTDLRKLA
NRMHFGLPQHNNSYQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcaagatgctagcaataatgttgaaattgatccggaatacgaggtgattgtt
ggctgcaacgcgttgtcagtggatattgaagatcaaataatgaggacttacaatttaatc
cgtgataactaccgtctgaaatttccggagctggagtcgattgttcaccaccctatagat
tatgcccgtattgtaaaaaaaataggtaatgagagtgacataagcttagttgatctagaa
ggccttctccgtcctcctatcattatggttgtatctattactgcttccaccaccagtggg
aagccactgccagatgatgttttacacaagactctcgaagcttgtgatcgtgcactagat
cttgattcagcaaggaaaaagcttgttgattttttggaaaccagaatgttttacattgca
ccaaatctttcagagcttgttggaagtggagttgctgcaaagcttatggtgtctgctgga
ggtttgggatcactcgcaaagatgccagcttgtaatgttcaacttgttggtgcccaaaca
aataatcttgctggattttcctgtcaatatcatcatcacattggttatttggagcaaact
gagatattcaggagcacaccccccggccccgctctcagaaagcgtgtttgtcgtcttttg
gcagcaaagtctacccttgtagcccgagtggattatacaagaggagacccaactgggaag
atgggaagggctcttcgacaagatattcacaacaagattgacaagtggcaacagctacct
cctcccaagattgtcaaacctctactgcttcctaatttagtaccaaaaaagaaaagagga
ggaccaaggttgaggaagatgaaggagagatatgctgttacggacctcagaaagttggca
aataggatgcactttggactgccccaacacaataattcttatcagtaa
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