Silene latifolia (white campion): 141639627
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Entry
141639627 CDS
T11116
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00906
Carotenoid biosynthesis
slaf01100
Metabolic pathways
slaf01110
Biosynthesis of secondary metabolites
Module
slaf_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
141639627
Enzymes [BR:
slaf01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
141639627
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GDI
GIDA
FAD_oxidored
HI0933_like
Thi4
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
141639627
NCBI-ProteinID:
XP_074304802
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MQSLSSSQPFINSTIPLQSPNNFNKNPNLRFPAKLSTTQFNSCKNRKRVSVNSQFKGLQF
LGLCNSFEKQKNSLFGSLGCVNCTKVCNFMCDGLKLGFSNSEKFRVFEVNCVVGGRKMGT
LGKLRAVMNVDEVVGEEVSGGEDKEKYDAIVIGSGMGGLVAATQLAVKGAKVLVLEKYVI
PGGSSGFYERDGYVFDVGSSVMFGFSDQGNLNLITQALAAVGHKMEVIPDPTTVHFHLPN
TLSVQVHRYYDDFVTELTSKFPHEKEGILKFYGVCWKIFNALNSLELKSLEEPLYLFGQF
FQKPLECLTLAFYLPQNAGEIARKYIKDPELLSFIDAECFIVSTVNALQTPMINASMVLC
DRHFGGINYPVGGVGGIAKSLAQGLVDQGSKILYKANVTSIILEHGKAVGVRLSDGREFY
ARTVISNATRWDTFGKLLKSEKLPKEEESFQKLYVQAPSFLSIHMGVKAEVLPPDTDCHH
FVLETDWKDLEKPYGSIFLSIPTVLDSSLAPEGHHILHIFTTSSIDDWQGLSRAGYNEKK
ELIADEIISRLEKKLFPGLKSSITFMEVGTPKTHRRYLARDNGTYGPMPRAVPKGLLGMP
FNTTAIDGLYCVGDSCFPGQGVIAVAFSGIMCAHRVAADIGFEKSSPVLDAALLRLLGWF
RTLA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccctttcctcttctcaacccttcattaactccacaattcctctacaatctccc
aacaacttcaacaaaaatcccaacctcaggtttcctgcaaaattatcaactacccaattc
aattcttgcaaaaacagaaaaagggtatcagttaattctcaatttaagggtttacagttt
ctgggtttatgtaattcatttgaaaaacaaaaaaattcattgtttggttcattgggttgt
gttaattgtactaaagtttgtaactttatgtgtgatggattgaaattagggtttagtaat
tcagagaaatttagggtttttgaggtgaattgtgtagtgggtgggagaaagatgggaact
ttagggaagttaagggcagtgatgaatgtagatgaagtagtgggggaagaagtgagtgga
ggtgaagataaggagaagtatgatgcaattgttatcgggtccggtatgggtgggttggtt
gctgcaacacagttggctgtgaagggagcaaaggttttggtgttggagaagtatgtaatt
cctggtggtagttctgggttttatgagagggatgggtatgtatttgatgtcggttcttct
gtgatgtttggcttcagtgatcagggtaatctgaacttaatcactcaggcgttagcagca
gtaggtcataagatggaggtcataccagaccctaccactgtccactttcacctaccaaat
actctttctgttcaagtgcacagatactacgacgactttgtcactgaattgactagtaaa
tttccccatgagaaagaaggcattctcaaattctatggggtgtgttggaagatctttaat
gctttgaactcattggagctgaagtcacttgaggaacctctctatcttttcgggcagttc
tttcaaaagcctcttgaatgtttaacccttgccttttacttaccgcaaaatgctggagaa
atagctcgaaaatatattaaggatcctgaactgttatcctttatagatgctgagtgtttt
attgtgagcaccgttaatgctttgcaaactccaatgattaatgcaagtatggtactatgt
gataggcatttcggagggatcaactatccggtaggtggtgttggtggaatagccaagtct
cttgcacaaggcctagttgaccagggaagcaaaatactttacaaagcaaatgtgacaagc
atcattctggagcatgggaaagctgttggagtgaggctttctgatggacgggagttttat
gctcgaaccgttatatcaaatgccactcgatgggatacctttggaaagcttttgaaatct
gagaagcttccaaaagaagaggaaagttttcagaaattatatgtccaggccccatctttt
ctttcgatacacatgggagtcaaggctgaagttttacctccagatacagattgccaccac
ttcgttcttgagaccgactggaaagatttagaaaagccttacggaagcatatttttgagc
attccaacagttcttgattcctcgttggctcctgaaggacatcacatactacacatattt
acaacttcttccattgatgactggcagggactttctcgtgcaggctacaatgaaaagaag
gaacttatcgcagatgaaatcattagcagattggagaagaagttgtttccagggctaaaa
tcttcaatcacatttatggaggttggaactccaaagacacacagacggtacttggctcgt
gataatggcacatatggaccgatgccacgggctgttccaaaagggttactcggaatgcca
ttcaatacaacggcaatagacggtctttactgtgtcggtgatagttgcttcccagggcaa
ggggtcatagctgtagctttttcaggaataatgtgtgctcatagagtcgcagctgatatt
gggttcgagaaatcttccccggtacttgacgctgcgctccttcgtttgcttgggtggttt
aggacattggcatga
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