Silene latifolia (white campion): 141642056
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Entry
141642056 CDS
T11116
Name
(RefSeq) syntaxin-51-like isoform X1
KO
K08503
syntaxin of plants SYP5
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
141642056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141642056
Membrane trafficking [BR:
slaf04131
]
SNARE
SNAP-25[C] (Qc)
STX8
141642056
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPAM
NPV_P10
DUF6781
TRP
DUF3496
MCM3_WHD
Allexi_40kDa
DUF3675
STX6_10_61_N
SNARE
Motif
Other DBs
NCBI-GeneID:
141642056
NCBI-ProteinID:
XP_074306821
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Position
2:4219727..4224430
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AA seq
231 aa
AA seq
DB search
MTSPAEKWMRDYNDASKLADEINSMVSEASTLPPTGPQTQRHFSATRRKISIINNKLDSL
GKFLAELPTRQTLSGKEMNKRNDMMANLNTKVNQMANTLNSYSSANRDRLLGPDTKSDDV
MKRASNMDNNGLVGFQRQVMREQDDDLEKLEITVVSTKHIALAVNEELDLHTRLLNGLDD
HLEATGSRLQRIQRSLGALNRKTKGGCCCSILVVILIVILVLVAFVLIKYL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccctgctgagaaatggatgcgggattataatgacgcatcaaagctggctgat
gagataaatagcatggtgtctgaggcgagtactttgcccccaacaggaccacaaacacaa
cgtcatttttcagctactcgtagaaagatcagcataataaataacaaacttgacagcctg
gggaaatttttagcggagctaccaaccaggcaaactttgtccggaaaggagatgaataaa
cgtaatgacatgatggcgaatttgaataccaaagtcaaccaaatggcaaacactctcaat
tcatacagttcggcaaacagggatcgtttgcttggccctgatacaaaatcagatgatgta
atgaagagagcatctaacatggacaataatggtcttgtaggttttcagcgacaggttatg
agagagcaagacgacgaccttgagaaattagagattacagtcgtaagtacaaaacatatt
gcattggcggtcaatgaagagctcgacctgcacaccaggctcctgaatggcttggatgac
catctggaggcgacaggttcccgtttacagcgtattcaaagaagtttgggcgctctcaac
agaaaaaccaaaggtggttgctgttgctcgatcctggtggttatattgatagtgattctc
gtccttgttgcattcgtattgatcaaatatctatag
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