Silene latifolia (white campion): 141642114
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Entry
141642114 CDS
T11116
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00450
Selenocompound metabolism
slaf00970
Aminoacyl-tRNA biosynthesis
slaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
141642114
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141642114
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slaf01007
]
141642114
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141642114
Enzymes [BR:
slaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
141642114
Amino acid related enzymes [BR:
slaf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
141642114
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
141642114
Prokaryotic type
Other AARSs
141642114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
C1_1
tRNA-synt_1e
Anticodon_1
DUF6664
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
141642114
NCBI-ProteinID:
XP_074306901
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All DBs
Position
2:5973070..5980804
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AA seq
842 aa
AA seq
DB search
MYLRKAICSRLTLLSPKSQQHSFSYHSCTKRSACTLILDSRATTMANLGDKRPILPVEGK
RNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNTIYVCGTDEYGTATETKAM
EENCTPKEICDKYHAIHKQVYEWFNISFDEFGRTSSPEQTEVCQAIFKKVEENNWLSENT
MQQLYCDTCERFLADRLVEGVCPTPGCNYDSARGDQCENCGKLLNPTELKEPKCKRCQCT
PHVRDTNHLFLELPLLQDKLEEYIKKTSEAGGWSQNAIQVTNAWLKEGLRQRCITRDLKW
GVPVPHERFKDKVFYVWFDAPIGYVSITACYTPEWEKWWKNPENVELYQFMGKDNVPFHT
VMFPSTLLGTGENWTLLKTISVTEYLNYESGKFSKSKGVGVFGNDAKDTNIPVEVWRYYL
LTNRPEVSDTLFTWPDLQAKLNSELLSNLGNFVNRVLSFIAKPTGQGYDSVIPDAPQAES
HSLTNILGEKVEKYVDQYVEAMEKVKLKQGLKIAMTISGEGNAYLQESQFWKLYKEDQAA
CAVVMRTSAGLVYVLACLLEPFMPSFSIEVLRQLNMPQLQVSLADENNDIQKIKKPWEIL
PAAHRIGKPEPLFKELKTEEMEFYREKFAGSQADRAVKAAAEKSAEQLKKTKIADGKEKK
KAVKSAGGSKTKSAPEPEITITRLDIRVGLITKVQKHPDADSLYVEEIDVGEAAPRTVVS
GLVNYIPIEKMQNRKVCVLCNLKPATMRGIKSHAMVLAASDSEHTKVELVDPPEDAQIGE
RVKFPGFEGEPDELLNPKKKVWETLQVDLNTDSNLVARFKDLPLTTSTGICKVSSIANGT
IK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtacttacgcaaggctatttgctcacgcttaaccctactctcgccgaagtcgcagcag
cattccttttcttaccatagttgcacaaaaagaagcgcttgtaccctaattcttgattct
cgagctacaacaatggcgaatctcggcgataaacgccctattttaccggtagaaggaaag
cgaaacgtccttattaccagcgctcttccttacgtcaacaatgttcctcatctcggcaat
atcatcggatgtgtgttgagtgcggatgtgtttgcaaggtattgtaggctgaggggatac
aacactatatatgtttgcgggacggatgaatatggtactgcaacggaaacgaaagctatg
gaggagaattgtactcctaaggaaatctgtgacaaataccatgcaatacacaagcaagtt
tatgaatggttcaatataagttttgatgaatttgggcgtacgtcttctcccgaacaaact
gaagtttgccaagctatttttaagaaagtggaggagaacaattggctttctgagaacact
atgcagcagctttattgcgatacctgcgaaaggtttctagcagaccgactcgtggagggt
gtttgccccacacctggttgcaattacgattctgctcgaggagatcagtgtgagaactgt
ggaaagcttctaaacccaacggagttgaaagagcccaagtgcaaaaggtgccaatgcact
cctcacgtccgtgatactaatcacttgtttctggagcttccgctgctccaggacaagctg
gaggagtatataaagaagacgtcagaagctggaggatggagccagaacgcgattcaggta
acaaatgcatggctcaaggaaggactgagacagcgatgtatcactagagatttgaaatgg
ggagttccagtcccacatgagaggtttaaagacaaggtgttttatgtctggtttgatgcc
ccaattggatatgtttcaattacagcatgctacactccagagtgggaaaaatggtggaaa
aatccggaaaacgttgaactctatcaatttatgggcaaggacaatgtgccatttcacact
gtgatgttcccatctacacttcttggtaccggagaaaactggactttgttgaagactatt
agtgttacggagtacttgaactacgaatcaggcaaattctctaaaagcaaaggtgttggc
gtttttggaaatgatgccaaggacaccaatattcctgtcgaagtatggagatactatttg
ctaactaataggccagaggtatcagacacattattcacatggccagatcttcaagcaaaa
ttgaacagcgagctgctgagtaatcttggcaattttgtaaatcgtgtcttgagctttatt
gctaagcctacaggtcagggatatgactctgtcattcctgatgctccacaggcagaatca
cactctttaactaacatattaggggaaaaagttgagaagtatgtagatcaatatgtagaa
gctatggagaaggttaagctaaagcagggtctgaaaattgcaatgaccatttctggtgaa
ggaaatgcatatttgcaggagagtcaattctggaagctttataaggaggaccaggctgcc
tgtgctgttgtaatgagaacttcagcgggattagtatatgtcctggcgtgtttattggag
ccttttatgccgtctttctctattgaggtgcttaggcagctgaatatgccccaacttcaa
gtttccctggccgatgaaaacaatgacatacagaaaatcaagaagccatgggagattcta
ccagcagctcacagaataggaaaaccagagccactgttcaaggaactgaaaactgaagag
atggagttttatcgagagaagtttgctgggagtcaagctgacagggctgttaaagctgcc
gccgagaaatcagcagagcagttgaagaaaacaaaaattgcagatggaaaagagaagaaa
aaggcagttaagtcggccggtggaagcaaaaccaagtcggctcctgaacccgaaatcaca
atcaccagacttgatatacgtgttggcctaatcacaaaggttcaaaaacatcctgatgct
gattccctgtatgttgaagagattgatgttggtgaagcagcacccagaactgttgtcagt
ggacttgtcaactacatacctattgaaaagatgcagaaccgcaaggtatgcgttctttgt
aacttgaagccagctaccatgaggggaatcaagtctcacgctatggttcttgcggcttct
gacagtgaacacacaaaggttgagctagtggacccgccggaggatgctcaaatcggggag
agagtcaagttcccaggttttgaaggggaacctgatgagcttctcaaccctaaaaagaag
gtatgggagacattacaagttgatctaaacacagactcaaatttggtggcacgttttaaa
gatttaccgttgacgacatccaccggtatttgcaaagtttcctccatagcaaacggaacc
attaagtag
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