Silene latifolia (white campion): 141642115
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Entry
141642115 CDS
T11116
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00450
Selenocompound metabolism
slaf00970
Aminoacyl-tRNA biosynthesis
slaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
141642115
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141642115
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slaf01007
]
141642115
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141642115
Enzymes [BR:
slaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
141642115
Amino acid related enzymes [BR:
slaf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
141642115
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
141642115
Prokaryotic type
Other AARSs
141642115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
C1_1
Anticodon_1
tRNA-synt_1e
DUF6664
Motif
Other DBs
NCBI-GeneID:
141642115
NCBI-ProteinID:
XP_074306902
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All DBs
Position
2:5965973..5972097
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AA seq
617 aa
AA seq
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MAKLGNKQPILPVDGKRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRRRGYNTIY
VCGTDEYGTATETKAMEENCTAKEICDKYHAIHKQVYEWFNISFDEFGRTSSPEQTEVCQ
AIFKKLEENNWLSENTMQQLYCDTCERFLADRLVEGICPTPGCNYDSARGDQCDKCGKLL
NPTELKEPKCKRCQSTPHIRDTNHLFLELPLLQDKLEEYIKKTSEAGGWSQNAIQVTNAW
LKEGLRQRCITRDLKWGVPVPHERFKDKVFYVWFDAPIGYVSITACYTPEWEKWWKNPEN
VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLLKTISVTEYLNYEEDKFSKSKGIGVFGN
DAKDTNIPVEVWRYYLLTNRPEVSDTKFTWSDLQAKLNSELLSNLGNFVNRVLSFIAKPS
GQGYDSVIPDAPQAESHSLTNILGDKVGKYVDQYVEAMEKVKLKQGLKIAMTISSEGNAY
LQESQFWKLYKEDQAACAVVIRTSAGLVYVLACLLEPFMPSFSIEVLKQLNMPQLQVSLA
DENNDIQKIKKPWEILPAAHKIGKPEPIFKELKDEDRKSYEKKFAGSQAGRAVEAAAEKA
EKSAEQLKKTKRINSQQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaactcggcaataaacaacctattttaccggtagatggaaagcgaaatgtcctt
attaccagcgctcttccttacgtcaacaatgttcctcatctcggcaatataatcggatgt
gtgttgagtgcggatgtgtttgcaaggtattctaggcgtaggggatacaatactatatat
gtttgtgggacggatgaatatggtacagcaacagaaacgaaagctatggaggagaattgt
actgctaaggaaatctgtgacaaataccatgcaatacacaagcaagtttatgaatggttc
aatataagttttgatgaatttggacgtacgtcttcacccgaacaaactgaagtttgccaa
gctatttttaagaaattggaggagaacaattggctttctgagaacacaatgcagcagctt
tattgcgatacctgcgaaaggtttctagcagaccgactcgtggagggtatttgccccaca
cctggttgcaattacgattctgctcgaggagatcagtgtgataagtgtggaaagcttcta
aacccaacagagttgaaagagcccaaatgcaaaaggtgccaatccactcctcacatccgt
gatactaatcacttgtttctggagcttccgctgctccaggacaagctggaggagtatata
aagaagacgtcagaagctgggggatggagccagaacgcgattcaggtaacaaatgcatgg
ctcaaggaaggactgagacagcgatgtatcactagagatttgaaatggggagttccagtc
ccacatgagaggtttaaagacaaggtgttttatgtctggtttgatgccccaattggatat
gtttcaattacagcatgctatactcctgagtgggaaaaatggtggaaaaatccggaaaac
gttgaactctatcaatttatgggcaaggacaatgtgccatttcacactgtgatgtttcca
tctacacttcttggtaccggagaaaactggactttattgaagactattagtgttacggag
tacttgaactacgaagaagacaaattctctaaaagcaaaggcattggcgtttttggaaat
gatgccaaggacaccaatattcccgttgaagtatggagatattatttgctaactaatagg
ccagaggtatcagacacaaaattcacatggtcagatcttcaagcaaaattaaacagtgag
ctgctgagtaatctcggcaattttgtaaatcgtgtcttaagcttcattgctaagccttca
ggtcagggatatgactctgtcattcctgatgctccacaggcagaatcacattctttaact
aacatattaggggacaaagtcgggaagtatgtagatcaatatgtagaagctatggagaag
gttaagctaaagcagggtctgaaaattgcaatgaccatttctagtgaaggaaatgcatat
ttgcaggaaagtcaattctggaagctttataaggaggaccaggccgcctgtgctgttgta
ataagaacttcagcgggattagtatatgtcctggcgtgtttattggagccttttatgccg
tctttctctattgaggtgcttaaacagctgaatatgccccaacttcaagtttccctcgcc
gatgaaaacaatgacatacagaaaatcaagaagccatgggagattctaccggcagctcac
aaaataggaaaaccagagccaatattcaaggaactgaaagatgaagataggaagtcttat
gaaaagaagtttgctgggagtcaagctggcagggctgttgaagctgcagccgagaaagcc
gagaaatcagcagagcagttgaagaaaacaaaaaggattaattcacaacaataa
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