KEGG   Silene latifolia (white campion): 141642149
Entry
141642149         CDS       T11116                                 
Name
(RefSeq) target of rapamycin complex subunit LST8
  KO
K08266  target of rapamycin complex subunit LST8
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf04136  Autophagy - other
slaf04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    141642149
   04136 Autophagy - other
    141642149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:slaf04131]
    141642149
Membrane trafficking [BR:slaf04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    141642149
   mTORC2 complex
    141642149
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_WDR41 ANAPC4_WD40 DSE1_N Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_Nup120_160 ASA1 WD40_RFWD3 WDR90_beta-prop_4th CFAP251_N Beta-prop_RIG_2nd Beta-prop_HPS5 NBCH_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_Aladin PAC11 Beta-prop_DCAF12 SHKBP1_KCTD3_C Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Nucleoporin_N TRM82_WD PROPPIN Cytochrom_D1 CFAP43_N Beta-prop_WDR35_TULP_N DUF7899 VID27 Beta-prop_At4g14310 Beta-prop_WDR35_2nd Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 141642149
NCBI-ProteinID: XP_074306946
LinkDB
Position
2:complement(6743382..6747799)
AA seq 314 aa
MSQPSVILATASYDHTIRFWEAQTGRCCRNIQYPDSHVNRLEITPDKRFLAVAGSKHIRI
FDINSNNPQPLTSYDSHTNNVMAVGFSDDGNWMYSGSEDGTVKIWDLRAPGLQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAIRSLTVMWDGAMVVAA
NNNGTCYVWRLLRGTQTLTNFEPLHRLQAHKGYILKCLLSPEYSEPHRYLATASSDHTVK
IWNVDNRFSLEKTLSGHDRWVWDCVFSVDGAYLITASSDNTAKLWSVSSGEVIQTYSGHH
KAVVCCALNDGAEL
NT seq 945 nt   +upstreamnt  +downstreamnt
atgagtcaaccttcagtaattcttgcaactgctagttatgatcatactattcgattttgg
gaagctcaaactggtagatgttgtcgaaatattcaatacccagattctcacgtaaatcgg
cttgaaataaccccggataagcggtttctggcagtagctgggagtaagcacattcgtata
tttgatattaattcgaacaatcctcaaccgttgacgagttatgattcgcatacaaataat
gttatggcagttgggttctcggatgatgggaattggatgtattctggttccgaagatggt
acagttaagatatgggatttaagagctccgggtttgcaaagggaatatgaaagtcgtgct
gcagtgaacactgttgttcttcatccgaatcagactgaattaatttcaggggatcagaat
ggaaatatccgtgtgtgggatttgactgcaaattcatgcagctgcgaattggtaccagag
gtggatacggctatcagatctttgacagtgatgtgggatggtgccatggtagttgctgca
aacaacaatggaacctgttatgtttggcgattattacgtggaactcagactctgactaat
tttgagcctcttcatcggcttcaagcacacaaaggatacattctcaaatgtctcctttct
cccgagtattctgaaccccacagatacttggccactgcatcgtctgaccatacagtcaag
atatggaatgtagacaatcgattctcgttggagaaaactttatctggacatgaccggtgg
gtatgggactgtgttttttctgttgatggtgcttacctcattacagcttcgtccgacaac
acggcaaaactatggtctgtgtcaagtggtgaagtcatccagacctattcaggtcatcac
aaagctgtagtttgctgtgctctaaatgatggggctgaactttga

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