Silene latifolia (white campion): 141642221
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Entry
141642221 CDS
T11116
Name
(RefSeq) tubulin alpha-3 chain-like isoform X1
KO
K07374
tubulin alpha
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04145
Phagosome
slaf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
141642221
09142 Cell motility
04814 Motor proteins
141642221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141642221
03036 Chromosome and associated proteins [BR:
slaf03036
]
141642221
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
slaf04812
]
141642221
04147 Exosome [BR:
slaf04147
]
141642221
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141642221
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
141642221
Cytoskeleton proteins [BR:
slaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
141642221
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141642221
Exosomal proteins of other body fluids (saliva and urine)
141642221
Exosomal proteins of colorectal cancer cells
141642221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
141642221
NCBI-ProteinID:
XP_074307040
LinkDB
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Position
2:complement(9813514..9817725)
Genome browser
AA seq
449 aa
AA seq
DB search
MREVISIHIGQAGIQVGNSCWELFCLEHGIHNDGIMPSDTSVGVEHDSFNTFFSETGSGK
HVPRAVFVDLEPTVIDEIRTGPYRQLFHPEQLISGKEDAANNFARGHYTVGKDIIDLCLD
RVRKLADSCTGLQGFLVFNAVGGGTGSGFGSLLLERLSVEYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRKSLNIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITSSVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKSKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALERDYEEVGAEDAAGEDEDEDY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagagaggttattagtattcatattggtcaagctggtattcaagtgggtaattcttgt
tgggagcttttttgtcttgaacatggtattcacaatgatggtatcatgcctagcgataca
tcagtaggtgttgaacacgattcattcaacacgttcttcagtgagacgggttcaggaaag
catgtgcctagagctgtgtttgttgatttggagccaactgtgatcgatgaaataaggaca
ggaccatatcgacaacttttccatcccgagcagctcatctccggaaaagaagatgctgcc
aacaactttgctcgaggccactacacagtggggaaggacatcattgatctttgccttgat
cgagtaagaaaattagctgacagctgcactgggcttcagggcttcttggtattcaatgct
gttggtggtggaactggttctggtttcgggtcattacttctagaacgcttgtctgtagag
tatggaaagaagtcgaaacttggatttacgatctatccttctcctcaggtttctacggca
gttgtagagccatacaacagcgtgctctcgactcattctcttctagagcacacagacgta
gttgttcttcttgacaatgaagcaatatacgatatatgtaggaaatcacttaacatcgag
aggcctacctacaccaacttgaaccgcttaatatcccaaataatctcttcattgacgaca
tctctgaggtttgacggagccatcaatgtggatgttacagagttccaaactaacctggtt
ccataccctcggatccatttcatgttatcatcatatgcccctgtcatttctgctgaaaag
gcttaccatgagcagctttctgtgcctgagattacgtcttctgtgtttgagccttccagt
atgatggctaaatgtgacccacgccatggcaaatacatggcgtgttgtttgatgtatcgt
ggtgatgtcgttcccaaggatgttaatgctgctgtcggaaccattaagagcaaacgaact
gtccagtttgttgactggtgcccaaccgggtttaagtgtggtatcaactaccagccacca
acagtagtgccaggaggcgatctagccaaggtgcagcgtgcagtctgcatgatcagcaac
aacacagcagtggccgaagtgtttgctagaattgatcacaaattcgatctgatgtacgca
aagagagcattcgttcactggtatgttggtgaaggtatggaggaaggcgagttctcagaa
gctcgggaagaccttgctgcccttgagagagactatgaggaagtcggggctgaggatgct
gctggtgaagatgaagatgaggactactga
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