Silene latifolia (white campion): 141642264
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Entry
141642264 CDS
T11116
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Module
slaf_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141642264
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
141642264
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
141642264
NCBI-ProteinID:
XP_074307101
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All DBs
Position
2:11317142..11320145
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AA seq
419 aa
AA seq
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MGKDYYIKLFLVIILVGETLVLTESRGKGGGLRDGDGISEIPGPGEKVFNILSFDAKADG
ITDNVEAFMGAFRAACDHPGKARVLIPQGTFAVSQVVFAGPCKGTGPMVMQIVGTIMAVP
DVSMYPEPEWLIFEDLNGLVIFGGGVVDGQGAQVWEYADCDKNPNCARLSASIVLKRVTN
GSIRRITSLNPMGFHFFITRCKNIRMQRLNIKAPGDSPNTDGVHISSSDLIKLSRSRIAT
GDDCVGILQGSTQIAINKIVCGPGHGISIGSLGKYENEEDVSGVQVKNCTLRDTTNGLRI
KTFPFKPNVTPIKASGFLFEDIAFERVKNPIIIDQEYCGSGHSCVKGPSKIRISDIFFHN
IRGTTISPKAIDILCSSAVPCQNIYLNNINIAGVSGPTTGSCVNAKINHFGLQFPPVNC
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagattattacattaagctttttttggtgattattcttgtaggtgaaaccctt
gtattaacagaaagtagaggtaaaggtggtggtcttagagatggagatgggattagtgaa
attcctggccctggtgagaaagtattcaatatattgagttttgatgctaaggctgatgga
ataacagataatgttgaggcttttatgggagcttttagagcagcatgtgatcaccctgga
aaagcaagagtacttatcccacaaggaacatttgcagtgtcacaagtagtatttgcaggg
ccatgcaagggtacaggaccaatggtgatgcaaattgtaggaaccattatggcagtgcct
gatgtttcaatgtatcctgaacctgaatggcttatttttgaagatcttaatggtttggtc
atctttggtggtggagttgttgatggtcaaggtgcccaagtttgggagtatgctgattgt
gataagaaccctaattgtgctcgtctttccgcgtcaattgttctaaaaagggtgaccaac
ggctcaataaggagaattactagtctcaaccctatgggattccactttttcataactaga
tgcaaaaatattagaatgcaaaggctaaatattaaggcgccgggagatagccctaacact
gacggcgttcacataagttcatccgacctaatcaagctatccaggtcacgcattgcgacc
ggtgacgattgtgttggaatcctccaaggttcaactcaaattgcgatcaataaaattgtc
tgtggtcctggccatggtattagtattggtagccttggaaagtacgaaaatgaggaagat
gttagcggtgttcaagtgaagaactgtacacttcgtgacacaaccaatggtctgagaatt
aaaacattcccgtttaaacctaatgttactccaattaaagcttctggatttctattcgaa
gatattgcctttgaaagggtgaaaaatcctatcataattgatcaagaatattgtggctcg
ggtcattcttgtgttaaagggccatctaaaatcaggattagtgacatatttttccacaac
ataaggggaaccacgatatcacctaaggctattgatatcttatgcagctctgcagtgcct
tgccaaaatatatatctcaacaacataaatatagctggtgttagtggaccaactacaggt
tcatgtgttaatgccaagattaaccattttggactacaatttccaccagtgaactgctaa
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