Silene latifolia (white campion): 141642271
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Entry
141642271 CDS
T11116
Name
(RefSeq) lysine--tRNA ligase-like isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141642271
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slaf01007
]
141642271
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slaf03016
]
141642271
Enzymes [BR:
slaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
141642271
Amino acid related enzymes [BR:
slaf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
141642271
Transfer RNA biogenesis [BR:
slaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
141642271
Prokaryotic type
Other AARSs
141642271
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA-synt_2d
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
141642271
NCBI-ProteinID:
XP_074307119
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Position
2:complement(11861081..11898625)
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AA seq
681 aa
AA seq
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MTTRYFKDRVKIVSELKAKGVEVYRKFAVTSTFKGFLNKYKDLGSGEQLGHKECLAGRVN
GKHKSSKHILYTLCGGGEKIDAYAKAGDDLTTTMPVMYGDIVGVTGYPSKSKHGKLSIDI
KSMAMLSPCLHNLPALPKDVAKFSPGSPRDALKYSLKPDVRARKRYLDLLLNENVRDLFL
TRSTIISYLRKFLLDRDFLEVETPILDHIPGVGAAAPFATYFKDMKLYLRVAPEVKLKML
LAGGLDRVFEIGKQFRNESIDATHHPEFTSCEAYMTFADYEDMMSLTEDFLSGLVKDLTG
GYIVKFPDSKNGEPIEIDFTPPFRRLDILEELREMGGLAIPADLSSEEANDYLRQACDKC
GVVCKPPYRTARLLDKLINHILVPSCINPTFVINHPKVMSLMAKSHKLRPEITERFELYL
NQQELCNAYTELNDPMEQRERFSELLKELKGGDYEATELDEEFCESLEYGLPPSAGWGIG
LDRLVMFLTYSQAIKDVLLFPLLKPKVHDKKGETMEKGESGPSRAYSCSQRPGWFVNRMK
SGDWTSWKSCVKWEGLQFLLILAVKKQMIISDKHVTSVEWCVNRRTGQRLCNAYTELNDP
MEQRERFSELLKELKGGDYEATELDEEFCESLEYGLPPSAGWGIGLDRLVMFLTYSQAIK
DVLLFPLLKPKGDRDVQLRSF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgactactcgatatttcaaagatagggtaaaaatagtgtctgaactgaaagcaaaggga
gtggaagtgtaccgaaaatttgctgtgacgtcgactttcaaagggtttttaaacaaatac
aaggatcttggcagtggagaacaattgggacacaaagaatgtttggcagggagagttaat
ggaaagcacaagtcctctaagcatattctttacactttatgtggaggtggcgagaagatt
gatgcctatgctaaggctggggatgacttaactactacgatgccggttatgtatggggat
atagttggcgttacaggttatccgagtaaaagtaaacatggaaaactctcgattgacatc
aagtcaatggcaatgctctccccttgccttcacaatctccctgctttaccaaaagatgtt
gctaaattttccccaggatctccaagagatgcactcaagtactctttaaagccagatgtt
cgggcacggaaaaggtacctggacttgctcttaaacgagaatgtgagagatctatttctg
actcgttcaacaatcatttcctatttgagaaagtttctgctggatcgggattttctagag
gtggaaacacctatcctggaccacattccaggtgttggtgctgcagctccctttgctacc
tacttcaaagacatgaagctgtatcttcgcgttgctccagaagtgaagctgaaaatgctt
cttgctgggggattggatcgtgtttttgaaataggaaaacaatttagaaacgagagcatt
gatgcaacacaccacccggagtttacttcatgcgaggcatatatgacttttgcagattat
gaagatatgatgtctctcactgaagatttcctgagtggacttgtgaaagacctaacaggg
ggttatatcgtgaagtttccggatagcaagaatggagagccaattgagattgacttcacg
cctccttttaggcgattggacatcctggaagagttgcgtgaaatgggagggcttgcaatt
cctgctgatcttagcagtgaagaagcaaatgattatctcagacaagcatgtgacaagtgt
ggagtggtgtgtaaaccgccgtacaggactgcccgtcttcttgataagctcatcaaccat
attcttgtacctagctgcatcaaccccacatttgtgattaatcatccgaaagtgatgagc
ttgatggccaaatctcacaaattgagacctgagatcacagaaaggttcgaactgtacctg
aaccaacaggagctttgtaatgcctatactgaattgaatgatcccatggagcaacgggaa
agattttctgaactactaaaggaattgaaaggtggagactatgaggctacagagcttgat
gaggaattctgtgaatcattggagtatggtttaccgccgtcggctggttggggcattgga
ctggacagacttgtgatgtttctgacatactcacaagccatcaaggatgttttactattt
ccattgctcaaaccaaaggtacatgataagaaaggtgaaacaatggaaaagggtgaaagt
ggaccttcaagagcatattcatgttcccaacgtcccggatggtttgtcaatagaatgaaa
tcaggtgattggacatcctggaagagttgcgtgaaatgggagggcttgcaattcctgctg
atcttagcagtgaagaagcaaatgattatctcagacaagcatgtgacaagtgtggagtgg
tgtgtaaaccgccgtacaggacaacggctttgtaatgcctatactgaattgaatgatccc
atggagcaacgggaaagattttctgaactactaaaggaattgaaaggtggagactatgag
gctacagagcttgatgaggaattctgtgaatcattggagtatggtttaccgccgtcggct
ggttggggcattggactggacagacttgtgatgtttctgacatactcacaagccatcaag
gatgttttactatttccattgctcaaaccaaagggtgaccgtgacgttcaactgcgaagt
ttctga
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