Silene latifolia (white campion): 141642785
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Entry
141642785 CDS
T11116
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
slaf Silene latifolia (white campion)
Pathway
slaf04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
141642785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slaf04040
]
141642785
Ion channels [BR:
slaf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
141642785
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Paralog
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Motif
Pfam:
Ion_trans
cNMP_binding
DUF3671
IQ
Motif
Other DBs
NCBI-GeneID:
141642785
NCBI-ProteinID:
XP_074307833
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Position
2:60350703..60354414
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AA seq
728 aa
AA seq
DB search
MGFERSRSVRFREDVESGSHGENNSKNSDNTTSVLVVVNQNYGIGIDKTRLQPEATTKTT
TTSTLSASYLKKRVLSRVFSEDYDKEKKKISDPRGETIRRWSKVFLVACLVSLFVDPLFF
FLPSVRGDVTCIEIGITLELFLTLVRTLADVFYVLQIYVKFRTAYVAPSSRVFGRGELVV
DPHKIAARYVTKDLFLDVIAALPLPQILIWGVIPNLSGSMMMNTKNVLRFILIFQYLPRL
FLIFPLSAQIVKATGVVTETAWAGAAYNLMLFILASHVLGACWYLLSVERQEGCWKHNCS
VDRNRCQYQFFDCKRLNEPGRETWFISSNITNLCDPNQSSYPFGIYGEAVTSNVTSSPFF
NKYFYCLWWGLKNLSSLGQGLLTSTSVGEILFAIIVATLGLVLFALLIGNMQTYLQSTTV
RLEEWRIRRTDTEQWMHHRQLPPELRQSVRRYDQYKWIATRGVNEENLLKGLPMDLRRDI
KRHLCLDLVRRVPLFDQMDERMLDAICERLKPALCTEETFLVREGDPVNEMLFIIRGNLD
SYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKALSEVEAFALRA
EDLKFVAAQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKRRSLALERKALEEGP
VMFEPESKTLRMEASYAHSSPLTMTGISMYAKRLAASARKAGPKHSGLDSGVSGLQKPTE
PDFSVEED
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgaacgatcaagatctgtaaggtttagagaagatgttgagagtggaagtcat
ggagaaaacaactctaaaaacagtgacaatactactagtgtacttgtagtagtaaaccaa
aactatggaataggaatagacaaaacaagacttcaaccagaagccaccaccaaaacaacg
acgacgtcgacgttgtcagcttcatatttgaagaaaagggtactatcaagagtattctca
gaagattatgacaaggaaaagaaaaagatttctgatccaagaggtgaaacaatacgtcga
tggagcaaggttttcttagtggcatgcttagtctcactatttgttgaccctttgttcttc
ttcttgccttctgtaagaggggatgtcacgtgcattgagattgggatcacgttggagttg
tttctaacccttgtaagaacacttgctgacgtcttctacgtgctacagatttatgttaag
tttaggactgcctacgtggcgccgtcatctagggtgtttgggaggggtgagttagttgtc
gaccctcataagattgctgctcgctatgtaactaaggatttgtttttggacgtcattgct
gcgctacctctccctcagatattgatatggggggtgattcccaacttaagcgggtccatg
atgatgaacacaaagaatgtgctgaggtttatactcatatttcagtacctgcctcggcta
ttcctcatatttcctctgtcagcacaaattgttaaggccactggtgttgttaccgagact
gcctgggctggtgctgcttataatctcatgctctttatactggcaagccatgttttagga
gcttgctggtacctgctatcagtcgagcgacaagagggatgctggaagcataactgcagc
gttgaccgtaacagatgccaataccagttcttcgattgcaagagattaaatgaaccaggc
agagaaacttggtttatatcaagcaatatcacaaacttatgtgatcctaatcaaagtagt
tacccatttgggatatacggtgaagctgtgacatcaaatgttacttcatcccctttcttc
aacaaatatttctactgtctttggtggggactcaagaatctgagttctcttggtcagggc
cttttgacaagcacttctgttggggagatactgtttgcaatcatcgttgcgaccctggga
ttagtcctttttgcactccttattggcaatatgcagacatacctgcaatctacgacagtc
agattggaagaatggaggatcaggcgaacagacacagaacaatggatgcaccataggcag
ctgcctcccgagctaagacagtctgtcaggagatacgatcagtataagtggattgctaca
agaggagtcaatgaggaaaatcttctcaaaggccttcctatggatctacgcagggatatc
aaacgtcatctttgtcttgatcttgttcgtcgggttcctctattcgatcaaatggacgag
aggatgctagacgcgatatgtgaaaggctgaagcccgctctctgcacagaggagacattc
ctggtgagggagggggatccagtgaacgagatgttgttcataatcagaggcaaccttgac
tcctacacgacaaatgggggtcgaacagggttcttcaatagctgccggattgggccaggt
gacttctgtggtgaggagctgctgacgtgggctctggacccaaggcctagcgtgatcctc
ccttcatcaacccgaacagtcaaggccctgtcggaggtggaagccttcgctctgagagca
gaagacctcaagtttgttgcagcccaatttagaagacttcacagtaagcaattaaggcac
aaatttagattttattctcatcagtggagaacgtgggccgcctgttttatacaggcggct
tggagaagatataagagacggtcccttgctcttgagcgtaaggccctagaagaaggcccg
gtgatgtttgagccagagtctaagacattgagaatggaggcgtcttatgctcactcatcg
cctttgactatgacgggtatttccatgtatgctaaaagacttgcagccagtgctaggaaa
gcagggccgaaacactcgggtttggattcgggtgtaagtggacttcagaagcctactgaa
ccagatttctctgttgaggaagattaa
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