Silene latifolia (white campion): 141642905
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Entry
141642905 CDS
T11116
Name
(RefSeq) actin-related protein 4 isoform X1
KO
K11340
actin-like protein 6A
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141642905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141642905
03036 Chromosome and associated proteins [BR:
slaf03036
]
141642905
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slaf04147
]
141642905
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141642905
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
141642905
Chromatin remodeling factors
BAF complex
141642905
PBAF complex
141642905
GBAF(ncBAF) complex
141642905
SRCAP complex
141642905
INO80 complex
141642905
Exosome [BR:
slaf04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
141642905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
MreB_Mbl
Ppx-GppA
Motif
Other DBs
NCBI-GeneID:
141642905
NCBI-ProteinID:
XP_074307996
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All DBs
Position
2:complement(114932598..114949864)
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AA seq
463 aa
AA seq
DB search
MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGSIDQMDVDEPENPEKNLGSAPE
SNNTVKTLDSEKGKSRRKLYVGSQSLGFRRDNMEVLSPFKDGAVADWDIVDSIWHHAFRE
CLLVDPKEHPMLLAEPSFNTQQQRERAAELMFEKYKVPALFLAKNAVLTSFASGRATSLV
VDSGGGSTTVAPVHDGYVLQKAVLSSPIGGEFLTDCLTKSLESKGITIKPRYSFKRKEIG
SGQFQTVDLDFPNTTESYRLYCQRVIASDIKECVCRAPDIPYDETSYSNIPMTAYELPDG
QTIEIGADRFKTPDVLFNPSLVQTIPGMESYIDIAASARGLPQMVIESINKCDPDIRREL
FSSILLAGGTASMQQLKERLEKDLLENMKPYTHGDWKIIGRISVAEFYWYYFGSFICFLD
DLSSKIISGLTHTSYHCPDSNCMSLVTNGIIMASIYHSLSLLR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtggagatgaagtatcggcaattgtaattgacttgggttctcacacttgtaag
gctggctatgccggtgaagatgctcctaaggccgtctttccttcggtcgttggatcaatt
gaccaaatggacgttgatgagcctgaaaatcctgaaaagaacttgggttcagctcccgaa
tctaacaatacagtgaaaaccttggattcagagaaaggaaaaagcaggcgcaagttatat
gttggatcacaatcattaggattccgtcgtgataatatggaggtcttgtctccgtttaaa
gatggagctgttgcagactgggatattgttgacagtatatggcaccatgctttcagggag
tgcctattggttgatccgaaagagcatcccatgttacttgcagagccgtctttcaatact
caacaacaaagagaaagggctgcagagctgatgtttgaaaaatacaaagtgccagcattg
tttctagccaaaaatgcagttcttacttcatttgcgtcaggacgcgcgacctctttagtg
gttgacagtggaggaggttcaaccactgtagccccagtacatgatggttatgttctccaa
aaggcggtcttgtcttcaccaattgggggtgaatttctgactgattgtttaaccaaaagc
ttggaaagtaaaggcatcactattaaacccaggtattcctttaaaagaaaggagataggg
tccggacaatttcagactgttgatcttgactttccaaacaccacggagagttacaggctg
tactgtcagagagttattgctagtgacatcaaggaatgcgtatgccgagcacctgatata
ccatacgatgaaacttcgtattccaacattcctatgacagcatatgaacttcctgatgga
caaacaattgaaattggagctgacaggttcaagactcccgatgttttattcaacccctca
ctggttcaaactattccaggcatggaaagctacattgatattgctgcatcagctcgtgga
ctgccacagatggttattgaaagcatcaataagtgtgatcctgacatacgaagagaactc
tttagtagcatactgcttgctggtggtacagcatcgatgcagcaattgaaagaacgtctt
gaaaaagatcttctcgagaacatgaaaccttacacacatggtgactggaaaattattgga
aggatttctgttgcagaattttattggtactactttggttctttcatctgttttttggat
gatttatcctctaaaataataagcgggttaacacatacctcttatcactgtcctgactct
aattgcatgtccttggtgacaaatggtataataatggcatcaatttatcacagtttgtca
cttttaagatga
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