Silene latifolia (white campion): 141643014
Help
Entry
141643014 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141643014
KO
K08518
syntaxin-binding protein 5
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slaf04131
]
141643014
Membrane trafficking [BR:
slaf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141643014
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
141643014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WD40_WDHD1_1st
WDR55
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
PEP5_VPS11_N
Synaptobrevin
Beta-prop_WDR90_POC16_2nd
PorZ_N_b_propeller
Lgl_C
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
141643014
NCBI-ProteinID:
XP_074308137
LinkDB
All DBs
Position
2:134333148..134348877
Genome browser
AA seq
1102 aa
AA seq
DB search
MFTKLFSKKSSGSQDGSHSQKQESLIDLNPRVISHYGIPSTASRLAYDPIQQLLAVGTLD
GRIKVMGGDNIEGLLASPKEIPFKNIEFLHNQGFLVSISNENDIQVWDLEHRHIAASLHW
QSNITAFAIIQETNYMYVGDDCGLVNVLKYDARERNLLTQKFNIPPNSVSEAAATSLLDY
QSVVGILPQPCSGRKRVLFAYDSGVIVLWDVSKDQLVLIRGLNDQQINDRATHPTKGRTS
NQKDKTTCDEQERKEVISLCWASLDGSVVAVGYVDGDILLWNLSSADKRLVNNMVKLQLS
SADKRFPVIVLHWSASGLDNDHGGQLFVYGGDEIGSSEVLTILSLEWSPGRDALKSIIRA
NITLEGSFADMILLPAFNIVENTGTTSLFLLSSPGQLQFFDGPCLSEIISHHDNSCTIPV
NYRSTVPTTEPYLTVGKLVLVHKNTQHSLVLSEMASELKKTLHINDTNTKWPLNGGLPCQ
LPPPRERIVERLYIAGYKDGSVRLWDATYPMLSPLCILSPEVRGISTPGATASISAVDFS
TETLNIAVGNSSGMVCLYLLAKNTVEAKLHVVSGSETKVYDVDEENRSQLSAVFTMSNSP
VCTLRYIEHGARLAVGYESGQVTVLSVNSPSVLFVIDALSSSSSPIVSLSSTIFRDNSGL
AKSLDESESGRSAPRKELTIALRRDALVATLDSSDGCIISSTPKEHIIESPAISMYILED
TKCVSEIFGGTYPHALPQEDKANTETEEPSGHTDGSFEGIERSLNGVQSSENLRVLVCCT
EMLLLYSFESLIQGHFDSIFEVKLQRPICWTSVFKIDEARHALLLLYQNGSIEIRCLPKL
EVLGKLSLMSILRWNFKTNMEKTISSTENGQLTLVNGCEFAVVSLLARENDFRIPQSLPC
LHDKAMAAALNMNFSLSQKKNKETPSGILGGMIKGLRASKKARSTDHLEDLNSPRSSLDR
IFSRSSDDPIKPAKDAGEVMELNIDDIEIEGPLRVTPIAENIKLVDKDKSTERKKLFEGA
TSEKPKQRSINDIKAKYRKNTSSDVASAASAASEARNKLLERQEKLDRIGQNSEELRNGA
ENFASMAKELAKRMENRKWWQL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccaaattgttcagcaagaagtcttctgggtctcaggatggctcacattcacag
aagcaggagtcactgattgacttaaatccacgagttattagtcattatgggatcccttct
actgcgtctcgccttgcttatgatcccattcagcagcttttggccgttggaacactagat
ggaagaattaaagtcatgggcggtgacaatattgaaggcctcttagcatctcctaaggaa
atccctttcaaaaacatagagtttctccacaatcaaggttttctcgtcagcatttcaaat
gaaaatgacattcaggtttgggatcttgagcacagacatattgcagcctccttacattgg
caatcaaatataactgcatttgccatcatccaagaaaccaactatatgtatgtcggagat
gattgtggattagtcaatgtactaaaatatgatgccagagaaagaaacctcttgacacag
aaatttaatatcccgccgaattctgtttctgaggctgctgcgacttcattgcttgattac
cagtctgttgttggaattcttcctcagccctgttctggtaggaaaagggtactttttgcg
tatgatagtggtgtcattgttctatgggacgtctctaaagatcagctggttcttattaga
ggattgaacgatcaacagataaatgatagagctacacatcctacaaaaggcaggaccagt
aaccagaaggataagacaacatgtgatgaacaagagcgcaaagaggtcatctctctctgt
tgggcatcattagacggttcagttgtggccgttggctatgttgatggagatatattgtta
tggaatttgtcctcagcagataaaagattggttaataatatggttaaacttcagttgtcc
tcagcagataaaagatttcctgtcattgttctacattggtctgcaagtggattagataat
gatcatggtggccaactttttgtctatggtggggatgaaattggatcttctgaagttctt
acgatcttgagtcttgaatggtctcctggaagagacgctttgaagagcattatcagagca
aacatcacccttgaaggttcctttgctgatatgattttgcttcctgccttcaatatagtg
gagaatacaggcactacatcgttatttttgttgagcagtcctggtcagctgcaattcttt
gatggtccttgcttgtctgaaataatatctcatcatgataattcctgtactattcccgtc
aactacagaagtactgtgcctacaacagaaccatacttgactgtgggaaagctcgttttg
gtgcataaaaatactcaacattcattggttttgtcagagatggcttcagaattgaaaaaa
acattacacataaacgacacaaatacaaagtggcctttaaatggcggtctcccttgccag
cttccacctccaagagagagaattgttgaaagattgtacatagctggatacaaagatggt
tctgttcgactttgggatgcaacatacccaatgctgtcacctctctgtatattatctccg
gaggttagaggtatcagtactcctggtgcaactgcatcaatatcagccgtggacttttct
actgaaacattaaacatagcagttggcaatagcagtggcatggtttgcctttaccttctc
gctaagaatacggttgaagccaagttgcatgttgtatcaggatctgaaactaaagtctac
gatgtggatgaagaaaacagatctcaactttcggccgtgtttaccatgagcaattcccct
gtatgcaccttaaggtacattgagcatggagccagacttgctgttgggtatgaaagtggc
caggttaccgtgttgagtgtcaactcgccttctgttctgtttgtgattgatgctctctcc
agctcaagttcccctattgtatcattatcttcgaccatatttcgagataatagtggcctc
gcaaaaagcttggatgagtctgaatctgggcgtagtgcacccagaaaagagttaacgatt
gccttgagaagggatgcacttgttgcaacacttgatagctctgatggctgtattatcagt
tccactcctaaagagcatatcattgagtcacctgcaatttcgatgtacattctagaggat
actaagtgtgtttctgaaatatttggtggaacatatcctcacgccttacctcaggaagac
aaggctaatactgagactgaagagcctagtggacacactgatggaagcttcgagggaatt
gaaagatcgttaaatggtgttcaaagctccgagaacttgcgggttttagtttgttgcaca
gaaatgttactgttatactcttttgaatcccttatccaggggcactttgattccatcttt
gaagtgaaactccagagacccatttgctggaccagtgtcttcaagatagatgaagcgagg
catgcgctacttctactttatcagaatggctccattgagatcaggtgtctgccaaaactc
gaagtcttagggaagttgtctttgatgtcaattctgcgttggaatttcaagaccaacatg
gaaaaaaccattagttcaacagaaaatgggcaactaacattggtaaatggctgtgaattc
gctgtagtgtctcttttagctcgtgaaaatgatttcagaattccacaatctctaccatgc
ttgcacgacaaggctatggcagctgctttgaatatgaatttctctttgagtcaaaagaaa
aataaggaaaccccttccgggattttgggcgggatgataaagggattaagagctagcaaa
aaagctcggagtacagatcatttggaagacctaaattccccgcgttcatctttggataga
attttttcaagatcttcagatgaccctattaaaccagcaaaagatgctggagaagtaatg
gagcttaacattgacgatatagagattgagggacccctacgcgtaacgcctatagctgag
aacattaaactggtagataaagataaaagtacagaaaggaaaaagttgtttgaaggtgca
acttctgagaaaccgaagcaaagatcaatcaacgacatcaaagccaagtacagaaagaat
acctcatctgatgttgcctctgcagcttctgccgcatctgaagcaagaaacaagctcttg
gaaaggcaagaaaaactcgataggatcggtcaaaacagtgaagagttgcgaaatggagca
gaaaactttgcatcaatggcgaaagagctggccaagaggatggaaaatcgcaaatggtgg
caactatga
DBGET
integrated database retrieval system
