KEGG   Silene latifolia (white campion): 141643059
Entry
141643059         CDS       T11116                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
slaf  Silene latifolia (white campion)
Pathway
slaf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:slaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    141643059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slaf03021]
    141643059
Enzymes [BR:slaf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     141643059
Transcription machinery [BR:slaf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     141643059
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 141643059
NCBI-ProteinID: XP_074308181
LinkDB
Position
2:144255530..144264306
AA seq 1211 aa
MGLEGKDGLGTSSNGKAAFDDIDIDMLFDDDEIESEDDADVMDIDLHDVGELSLMNFCKK
ASSAFFKQYGLISHQINSYNNFVMYGIQKVFDAIGEIKIEPGYDPSKKGDGEWRYAWVRF
GKVELEQPMFWTGEKFLADGGKDFIKLLPRHARLQNMTYSARLKVETHLQVYTQEKVRSD
KFKTGKSEYVEKKILKDDKTDVIIGRIPVMVKSDICWMSEAEKGDCEFDNGGYFIVKGAE
KAFIAQEQICLRRLWVTSDPFWKVAYRSDNKRRRVHVKLVENPKADNIQGGEKVLSVYCL
STVEVPVWILFFALGVENDKEVVDLIDYNIDDGRITNILFASIHDADEKCDFRKGSSAFD
YIDSAIKESKFPPSESTKEFIDKNLFPSLSTAKQKARFLGYMVKCLLQGFSGRRKPDNRD
DFRNKRLELASELLERELRVHMRHAEKRMVKAMQRDLYGDRELYPIDHYFDASIVTNGLT
RAFSTGNWAHPYIRSDRVSGVVANLRRTNPLQTVCDMRKSRQQVSYTGKVGDARYPHPSH
WGKLCFLSTPDGENCGLVKNLAATGLVSSNLVEEDRIRLHKKMVNCGMETLIDDTCSSLT
GKAKVLMDGEWVGICGNSSTFVEELRRQRRRNQFLNQVEIKQDRENTEVRIFCDAGRILR
PLLVVENLRKIKLLKGDEFSFQTLLDKGILELIGVEEEEDCHTAWEIKYLFMGDKGKGLE
KYTHCELDMSFLLGVSCGIIPFANHDHARRVLYQSEKHSGQAIGYASTNPNIRIDTLSHQ
MYYPQRPLFRSVIADALGKPDSTLGRNQRLPKSEFFNGQNAIVAVNVHLGYNQEDSIVMN
RASLERGMFRTEHTRSYKAEVDNKDSVEKRRKFDDAVSFGKIQSKLGRVDSLDDDGFPHI
GANLQSGDIIIGRCSESGTDHSIKLKHTEKGMVQKVLLSANDDGKNFAVVSLRQVRSPCL
GDKFSSMHGQKGVLGYLESQENFPFTKQGIVPDIVINPHAFPSRQTPAQLLEAALGKGIA
CGGTLRYATPFSTPSVESITEQLHRAGFCRWGSERVYNGRTGEMVRSLIFMGPTFYQRLI
HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSD
HSQMHVCRKCKNIANVIQRSVAGGKKIRGPYCRFCESIDEIVKVNVPYGAKLLSQELFSM
GISLQFETQPC
NT seq 3636 nt   +upstreamnt  +downstreamnt
atgggacttgaaggaaaagatggtttggggactagtagcaatggcaaagcagcatttgac
gacatagatattgatatgttgtttgacgatgatgaaatcgaatctgaagatgatgctgat
gtcatggatatagacctccatgacgtcggggagctttctttgatgaacttctgtaaaaaa
gcatcatcggctttcttcaaacaatatggacttataagccaccagattaactcctataac
aactttgtgatgtatgggatccaaaaagtctttgatgccattggggagataaaaatcgag
ccagggtatgatccctcaaagaaaggggatggagagtggagatatgcctgggtaagattt
gggaaagttgagctcgagcaacctatgttctggacgggtgagaagtttcttgctgatggc
ggcaaagacttcattaaattgctccctcgacatgctcggcttcaaaatatgacttactct
gctcgactgaaagttgaaactcaccttcaggtatatactcaggaaaaggtcagaagtgac
aagttcaaaactggcaagtctgagtatgttgagaaaaagatattgaaagacgacaagact
gatgtaattattggaagaatacctgtgatggtgaagtctgatatatgttggatgagtgaa
gctgagaaaggcgactgtgaattcgataatggtggttattttattgtcaaaggtgctgag
aaggctttcattgcacaagagcagatttgcttaaggaggctttgggtaactagtgatcct
ttttggaaagttgcataccgatctgacaataagaggagaagggtgcatgttaagcttgtg
gaaaatccaaaagctgataatatacaaggaggggagaaagttctcagtgtttactgctta
tccactgtggaggttccagtatggatattgttctttgccctcggtgtggagaatgataag
gaggtagttgacttaattgactacaacattgacgatggtcgcatcacaaatattttattt
gcatccattcatgatgctgatgagaagtgtgactttcgcaagggtagtagtgcttttgat
tatattgatagcgctataaaagaaagcaaatttcctccatctgaatcaaccaaagagttc
attgacaagaaccttttccccagtctgtcaaccgccaagcaaaaggcccgcttccttggg
tacatggtcaaatgtctattgcaaggattttcaggtaggagaaagcctgataatagagac
gattttagaaataaacgtctagagttggcttcagagcttttagagcgggagcttagggtc
catatgagacatgctgagaagaggatggtgaaagcaatgcaacgggacctttatggtgat
cgtgaattgtaccctatcgaccattatttcgatgcgtcgattgtcaccaatggtctaacc
agagcattctccaccgggaactgggcgcacccttatataaggtctgacagggtttctggg
gtggttgcgaaccttaggcgaactaatcctttgcaaacagtttgtgatatgaggaaaagc
cgtcagcaggtttcatacactgggaaggttggagatgctagatacccacacccttcacac
tggggtaaactttgctttctatctacaccggatggtgagaattgtgggcttgtgaagaat
ctggctgctactgggcttgtcagcagtaaccttgtagaggaagatcgtataagactgcat
aagaagatggttaactgtggaatggagacactaatagatgatacttgtagctcattgact
gggaaagctaaagtgctcatggatggtgagtgggttggaatatgtggcaattcctcgaca
ttcgttgaggagctaagaagacagcggcgcaggaaccagttcttaaaccaggttgaaatc
aaacaagacagagaaaatacagaagtgcgcatattttgtgatgctggaagaattcttcga
ccccttctagttgttgaaaatctaaggaagattaagttattgaaaggggatgaattttct
tttcaaacccttctggacaagggaatacttgaattaattggggttgaggaggaagaggac
tgtcacactgcatgggagatcaagtatctcttcatgggtgataaaggaaaaggccttgag
aagtacactcactgtgagcttgacatgtcgtttttattaggtgtaagctgtggaatcatt
ccatttgctaaccacgatcatgctcgaagggttctttaccaatccgagaaacattctgga
caagctattggatatgcttccacaaaccctaatatcagaatagacactttgtcccaccaa
atgtattatcctcagaggcctcttttccggtcagtgattgctgatgctcttggaaaaccc
gattccacattgggcagaaaccagagactcccaaaatctgaattttttaatgggcaaaat
gctattgtggccgtaaatgtgcaccttgggtataaccaagaagattccattgtcatgaat
cgggcttcattggagcgaggcatgtttagaacagaacatacaaggagttacaaggctgaa
gtagataataaggactcggttgaaaaaaggcggaaatttgatgatgctgtcagtttcgga
aaaattcaaagcaaattgggacgagttgatagtctcgatgatgatgggtttcctcatatt
ggagctaaccttcaaagtggagatattatcattgggaggtgttcagagtcgggaactgac
cacagcatcaaactgaagcatactgaaaaaggaatggttcagaaagtacttctttcagct
aatgatgatggcaagaattttgctgttgtatccctcagacaggttcgttcaccatgtctt
ggggacaagttctctagtatgcatggtcagaagggtgtgctcggatacttggagtcgcaa
gagaattttcctttcacaaaacaaggcatagttccagatatcgtaatcaatcctcatgca
tttccctcgaggcaaactcctgcccagttactagaggctgctcttggaaaaggcattgca
tgtggtggtactttgagatatgctactccattctccaccccctctgttgaatccattaca
gagcaacttcatagggctggattctgtcgatgggggagtgaaagagtctacaatggtaga
accggtgagatggtccgctccctgatattcatgggtcccactttctatcaaaggctaatt
cacatggctgaggacaaagtcaagttccgcaacactggccctgttcacccactcacccga
caaccagtagcagacaggaaacggtttggcggaatcaaattcggggaaatggagcgtgac
tgtcttatcgctcatggtgcttccgccaatctgcatgagcgtctcttcacgcttagcgat
cattcccaaatgcacgtgtgccgcaaatgcaagaacatcgccaacgtcatccagagatcc
gtagcgggcggcaaaaagattcgagggccttactgtaggttctgtgagtctattgatgaa
atagtcaaggtgaatgttccatatggagccaagctattgtctcaggaactcttcagtatg
ggcatctcgcttcagttcgagacccaaccttgttaa

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