Silene latifolia (white campion): 141643151
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Entry
141643151 CDS
T11116
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03420
Nucleotide excision repair
slaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141643151
09124 Replication and repair
03420 Nucleotide excision repair
141643151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
slaf03051
]
141643151
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141643151
Proteasome [BR:
slaf03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
141643151
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
141643151
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_RAD5A
CUE
Dsc3_N
UBA_3
Permuted_GreAB-C
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
141643151
NCBI-ProteinID:
XP_074308293
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Position
2:complement(153979254..153989474)
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AA seq
388 aa
AA seq
DB search
MKIFIKTLKGTSFDIEVTPRDAIVDVKKHIENVQGAAVYPAEKQVLIYQGKVLKDTTTLE
ENNVAENSFLVIMLSKAKPAASGGPSTTAASSGQTQTGTPPATVPTSITPPVQPQAASES
VVAPAATAPSSEANVYDQAASNLVAGSNLDSTIQQILDMGGGSWDRDTVVRALRAAFNNP
ERAVEYLYSGIPEQAEVPPVARAPTATPAGGQAADLPTNVAQGAVPSSGPNASPLDLFPQ
GLPNVGSNAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQN
DFVRLMNEPVEGDGEGNVLPDLASALPPTLSVTPAEREAVERLEAMGFSRATVLQVYFAC
NKDETMAANYLLDHMDEFENEDDEGGLS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttcatcaagacactcaagggaactagcttcgacatcgaagttactcctcgc
gacgctattgtagatgtgaagaaacacattgagaatgtacagggtgctgcggtgtatcca
gctgaaaaacaggtgctcatctatcagggtaaggttcttaaggatacaacaacattggaa
gagaataatgttgccgaaaacagtttccttgttattatgttgagcaaggctaagcctgca
gcttctggaggtccatctacgactgcagcatcttctggtcagactcagactggtacacct
ccagcgacagtgccaacatcaattacgccgccagttcagccacaggctgcttcggaatct
gttgttgcacctgcagctactgctccatcctctgaagcaaatgtctatgatcaagctgca
tcaaatttagttgcgggaagcaacttggattctacaattcaacagattcttgatatgggt
ggtggaagctgggacagggatactgttgttcgggcactacgtgctgcctttaacaaccct
gagagggctgttgagtatttatattctggtattcctgagcaagctgaagttcctccagtt
gctcgagcacctactgccacacctgctggtggacaggctgcagatcttcctactaacgtt
gctcagggagctgtaccatcaagtggtccaaacgcaagtccattagacctatttccacag
ggtcttcctaatgtggggtcaaatgctggtgctggctcattagatttccttcgcaacagt
cagcagttccaagcattgcgagctatggtacaagccaatccccagatcttacagcctatg
cttcaagaactgggaaagcaaaacccgcatttgatgaggcttattcaagagcatcaaaat
gattttgttcgtctgatgaatgaacccgttgaaggagacggtgaagggaatgtacttcca
gatttggcttctgcattgccaccaactttgagtgtaacacccgcggagcgtgaagccgtt
gaacgtcttgaggctatgggctttagtagggctaccgttttacaagtctattttgcatgc
aacaaggacgagacgatggctgctaactacctcttggatcacatggacgagtttgaaaat
gaggacgatgaaggtggtctttcatga
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