Silene latifolia (white campion): 141643723
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Entry
141643723 CDS
T11116
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00900
Terpenoid backbone biosynthesis
slaf01100
Metabolic pathways
slaf01110
Biosynthesis of secondary metabolites
Module
slaf_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
141643723
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
slaf01006
]
141643723
Enzymes [BR:
slaf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
141643723
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
141643723
2.5.1.29 geranylgeranyl diphosphate synthase
141643723
Prenyltransferases [BR:
slaf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
141643723
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
141643723
NCBI-ProteinID:
XP_074309097
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All DBs
Position
2:complement(185239030..185240789)
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AA seq
376 aa
AA seq
DB search
MSNTNSTSLNLGFWVHRCNSIPRSRSSISPSWNYNNYNSMNSFPCSAQIPLSSKMPKISA
ILTQNDNNNPTTTTTQPKPEFDFKKYMMDQASKVNEALDKSIPLKHPEKIHEAMRYSLLA
GGKRVRPVLCIAACELVGGEESVAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNH
KVFGEDVAVLAGDSLLAFAFEYLAKATPSGKVPAGKIVRAVGELARAIGAEGLVAGQVVD
INLGGVEGVGMEELEFIHIHKTAKLLEAAVVLGAVLGGGSDDEVERLRRFARGIGLLFQV
VDDILDVTKSSEELGKTAGKDLVADKVTFPKLIGIEKSREYAERLNKEAKEQLIGFDPYK
AMPLIALADYIAYRQN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaccaactccactagtcttaatttagggttttgggttcatcgatgcaattca
attcccagatctagatcttcaatttccccttcttggaattataataattataatagtatg
aattcatttccatgttctgcgcaaattcctctctcttcaaaaatgcccaaaatctctgca
atcctcacacaaaatgacaataataaccctacaacaacaacaacacaaccgaaacccgaa
ttcgatttcaagaaatatatgatggatcaagcaagcaaagtcaacgaagcgctagacaag
tcaatcccactaaaacacccagaaaagatccacgaagcgatgcggtattcgttactagca
ggcggtaagagggttagaccagtgttatgtatcgccgcctgcgagctagtcggcggggag
gagtcagtggcgatggcggcggcgtgtgcggtggagatgattcatacaatgagtcttatc
catgatgatttaccatgtatggataatgacgatcttcgtagagggaaacccactaaccat
aaggttttcggcgaggacgtagctgtcctcgccggggattccctcttggccttcgctttt
gaatatttagcgaaggccactccctcgggcaaggtccccgctgggaaaattgtccgggca
gtcggggaacttgcccgagcaattggggcagaagggctggttgctggacaggtagttgat
attaatttaggcggagttgagggagtgggaatggaggagctggagttcattcatattcat
aagacggcgaaattacttgaagctgcggttgttttgggggcggtgttgggtggtgggagt
gatgatgaggttgagaggttacggagatttgcgagagggattgggttgttgtttcaggtt
gttgatgatatattagatgttacgaaatcgtctgaggagttggggaagactgctgggaaa
gatttggtggcggataaagtgacgtttccgaaattgattggaattgagaagtctagggag
tatgctgagaggttgaataaagaagctaaagaacagcttattgggtttgatccttataag
gctatgcctttgattgcgcttgctgattatattgcttataggcagaattga
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