Silene latifolia (white campion): 141643907
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Entry
141643907 CDS
T11116
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141643907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slaf03009
]
141643907
Ribosome biogenesis [BR:
slaf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
141643907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_2
TIP49
AAA_16
AAA_22
AAA_14
RNA_helicase
AAA_28
AAA_33
NPHP3_N
Viral_helicase1
AAA_18
nSTAND3
IstB_IS21
Rad17
ATPase_2
Mg_chelatase
Parvo_NS1
Bac_DnaA
AAA_3
NACHT
NB-ARC
AAA_19
TsaE
AAA_17
ABC_tran
Cytidylate_kin2
AAA_11
Nucleolin_bd
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
141643907
NCBI-ProteinID:
XP_074309396
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All DBs
Position
2:188374649..188381314
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AA seq
868 aa
AA seq
DB search
MGRRGGGGTPLRRHQSPISPAILRRRIYTCNINHLSPDDIAEHLYSTFPDYKHFKFIPFR
TKINQILHNFDLRPQNDAAFFQNDDVEDGGEDSDVRTSSRKKRRKVAADDEDEREQRLLE
RENEHFRRRSDIKSPENSTSDDEEVSGSDVEPEFDFMTRRTENSMSDDEEVSVSDVEPEF
DFMTRRTENSTSDDDKVSGDDVEPVFDFMNSLIRESYKGESSKSKTIDSGGGGGGGGIGE
ESNMKVEGARREKKISGEVAVVAAAVAEKSGSEVVDGSDGEAKGKGKEGGIRFRDLGGIK
EVIDELMMEVIVPLYHPELPKWIGVKPMSGILLHGPPGCGKTRLAQAIANETGVPFYQIS
ATEVVSGVSGASEESIRELFTKAYQTAPSIVFIDEIDAIASKRENLQREMERRIVTQLLT
CMDESHMMVKSSDKNSDTELDGKKSGYVLVIGATNRPDAVDSALRRPGRFDREIALGVPD
ENARAEILSVLTKKLRLAGDFDLRKIAKATPGFVGADLVALANKAGNLAMKRIIDLRRSG
ISSEEEKLAEEWWKEPWSPEEMKNLSITMSDFEFAVKLVQPSSRREGFSTIPDVKWEDVG
GLDGLRKQFELYIVNRIKYPTQYEESGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFI
HIKGPELLNKYVGESESHVRRIFSRARTCAPCILFFDEVDALTTERGKEGGWVVERLLNQ
LLIELNGGDHRRGVYVIGATNRPEVMDHALLRPGRFGKLLFVPLPSSDERGMILTALARK
KPIDASVNLLDLGARCENMSGADLSALMNEAAMAALEEKLKSSTTVCGGCSSNIKSVHFE
LAMSKVKPSVSEKQKQYYEKLSQTFRAV
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaagaggcggtggaggtacaccactgcgccgccatcaatctccaatttctcca
gcgatactccgccgccgtatctatacttgtaatatcaaccacctttcccccgacgacatt
gccgaacacctctactctactttccctgactacaagcacttcaagttcatccctttccgc
actaaaatcaatcaaatcctccataacttcgacctccgtcctcaaaacgacgccgctttc
ttccaaaatgacgacgttgaagacggcggtgaagattccgacgtacgcacgtcttctcgg
aagaagcgccggaaagttgcggcggatgatgaggatgaaagagaacagcggttgttggag
agagagaatgagcactttcgccgacgtagtgatataaaatcaccggaaaattccacctca
gacgatgaagaggtttccggcagtgacgtagagccggagtttgattttatgacacgtcgg
acagaaaattctatgtcagacgacgaagaggtttccgtcagtgacgtagagccagagttt
gattttatgacacgtcggacagaaaattctacgtcggatgacgacaaggtttccggcgat
gacgtggagccggtttttgattttatgaactctttgattagggaaagctacaaaggcgag
agctcgaaatcgaaaacaatcgacagtggtggcggtggcggtggcggtggcataggcgaa
gagagtaatatgaaggtggagggtgcgaggagagagaaaaaaatttccggcgaagtggcg
gtggtggcggcggcggtggcggagaagagtggaagtgaagtggtggacggcagtgacggc
gaggcgaaagggaaggggaaagagggaggaattaggtttagggatttaggagggattaag
gaagtgattgatgagttgatgatggaagtgattgtgccattgtatcatccggaattgcct
aagtggattggtgttaagcctatgtctggtattttgttgcatggtcctcctggttgcgga
aagacgaggttggctcaagcgattgcaaacgagactggtgttccattttatcagatttct
gctactgaagttgtttctggtgtttctggtgcatcggaggagagtatccgtgagcttttt
acaaaagcataccaaactgctccatcaattgtatttatagatgaaattgatgctattgcg
tctaaaagagaaaatcttcagagggagatggagcggcgaatagtgacccagttgctgaca
tgcatggatgaatctcatatgatggtgaaaagtagtgataagaattcagatactgaactt
gatggaaaaaagtcgggatacgttcttgttattggagctactaatcggccagatgctgtt
gactctgcattaagaagacctggacgttttgaccgagaaattgcattgggagtgccagat
gaaaatgcgagggctgagatactctcagtgttaacaaaaaagttaaggcttgcaggtgac
tttgatctgagaaagatagccaaggccactccaggctttgttggtgctgatttggttgct
ctggctaacaaagctggtaatcttgccatgaaaagaattatcgatctgagaaggtcaggt
atatcttcggaggaggaaaaacttgcagaggaatggtggaaggaaccttggtcgcctgaa
gaaatgaagaacctaagcattaccatgagtgactttgagtttgcagttaaattagtgcaa
ccatcttcaagacgagagggattctctaccattcctgatgtaaaatgggaagacgttgga
ggacttgacgggttaagaaaacagtttgagctttacatagtaaatcgtatcaaataccct
acgcagtatgaggaatctggggtggacttggaaacaggatttttgctttatggcccccct
ggttgtggcaagactctgattgcgaaagctgtagccaatgaggctggtgcgaacttcata
catatcaagggccctgaacttctaaacaaatatgttggtgaaagtgaatcgcatgtacgg
cgaatattcagtcgggcaagaacatgtgctccatgcattttattctttgatgaggtcgat
gccctgaccacagaacgtggaaaggaagggggctgggtcgttgagcggcttttaaaccag
cttttgattgagctgaatggtggagaccacaggcgcggtgtgtatgtaattggtgctaca
aacagacctgaagtgatggaccatgcactgcttaggccaggaaggtttggaaaattgttg
tttgtccctctacccagttccgatgagcgtggcatgattcttacagctcttgctcggaaa
aagccaatagatgctagcgtaaatttgcttgatctgggagcgcggtgtgaaaatatgagt
ggtgctgacctttctgcactgatgaatgaagcggcaatggccgcattggaagaaaagctc
aaatcatcaacgactgtctgtggtggctgttcatcaaacatcaagtctgttcattttgag
cttgccatgagcaaagttaaaccatcggtttctgaaaagcaaaagcagtactatgagaag
ttgtcacagacatttcgagctgtctaa
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