Silene latifolia (white campion): 141643941
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Entry
141643941 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141643941
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03015
mRNA surveillance pathway
slaf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141643941
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141643941
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slaf01009
]
141643941
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slaf03019
]
141643941
03036 Chromosome and associated proteins [BR:
slaf03036
]
141643941
Protein phosphatases and associated proteins [BR:
slaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
141643941
Messenger RNA biogenesis [BR:
slaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
141643941
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
141643941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
PDS5
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_EZ
Htt_N-HEAT_1
Adaptin_N
Cnd1
CLASP_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
141643941
NCBI-ProteinID:
XP_074309445
LinkDB
All DBs
Position
2:complement(189030965..189040416)
Genome browser
AA seq
584 aa
AA seq
DB search
MMEEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDE
VLLAMAEELGLFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMKESDL
VDHFIPLVKRLAAGEWFTARVSACGIFHIAYPSAPDALKSELRSIYRQLCQDDMPMVRRS
AASNLGKFAATVEPSHLKTDVMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHV
LPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAAAG
KVTKFSRILSPELAIQHILPCVKDLSSDSSQHVRSALASVIMGMAPVLGKDATIEQLLPI
FLSLLKDEFPDVRLNIISKLDQVNEVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIP
LLGSQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNVKRLAEEFGPEWAMQHIVPQVLE
MMNNPHYLYRMTIVNAISLLAPVLGSEITCSKLLPVVITASKDRVPNIRFNVAKVLQSIA
PIVDQSVAEKTIRPCLAELSEDPDVDVRFFAIQALQSIDNAMVS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggagccattgtatccgatagctgtgttgatagatgagctaaaaaatgatgat
atacaattaaggctaaattctattagaagattgtcgacgattgctcgtgctcttggagag
gagcgaacgagaaaggagttgattccgtttttgagtgagaacaatgatgatgatgatgag
gttcttcttgctatggcggaggagttgggcttgtttattccatatgttgggggtgttgaa
catgcccatgttttgcttccgcctcttgaaaccctttgcaccgttgaagaaacttgtgta
agggataaagcagtcgagtcgttgtgtaggattggatcacaaatgaaggagagtgatttg
gtagatcatttcattcctcttgtgaagagactagcagcaggagaatggtttactgctcga
gtatctgcttgtggcattttccacatcgcttatccaagtgcgccagatgcacttaagtca
gagttacgatcaatctatcgtcagttgtgtcaagatgacatgccaatggttagaagatct
gctgcctcgaatttggggaagtttgctgcaactgttgagcctagtcatctaaagaccgat
gtgatgtcgatgtttgaggacttaactcaagatgatcaggactctgtgaggttattagct
gttgagggttgtgccgcccttgggaaactgttggagccgcaggattgtgttgcacatgtg
cttcctgttatcgttaatttctctcaggacaagtcttggcgtgtccgatatatggttgcc
aatcagttgtatgagctttgtgaggctgttggccctgagcctaccagggcggatcttgtc
cctgcatatgtgcgattacttagagataacgaagctgaagtacgtatcgcagctgccggg
aaagttaccaagttttctcgaattttgagtccagagctggcaatccagcatattctgcca
tgcgtgaaggatttatcatcagattcttctcagcatgttcgctccgctttagcgtctgtg
atcatgggaatggcccctgttttaggcaaggatgctacgatcgagcaactcctcccaatt
ttcctttccctccttaaagacgagttccccgatgttcgtcttaacataatcagtaaactt
gatcaagttaatgaggttattggcattgacctgctttctcaatcactcttgcctgccatt
gtggagcttgctgaggatagacattggagagttcgtcttgcaataatagagtacatccca
ttacttggaagccaactaggagttggtttttttgacgataaacttggtgcactgtgcatg
cagtggttacaggataaggtacactccattcgtgaagctgctgctaataatgtgaagcgg
cttgcagaggaatttggtcctgagtgggccatgcagcacatagttccacaggttttggag
atgatgaataatccacactatctctaccgaatgaccattgtgaatgcaatttcattactt
gctcctgttttgggttcagaaattacatgctcaaaactattgccggttgtcattactgcc
tcaaaggacagggttcccaacataaggttcaacgtggcaaaggtgttgcagtcaattgca
cctatcgtcgatcagtctgtggcagagaaaactattcgcccttgtttagccgagctaagt
gaggaccctgatgtcgatgttcgtttttttgcaattcaagctctccaatcgattgataac
gcaatggtgtcgtaa
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