Silene latifolia (white campion): 141644065
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Entry
141644065 CDS
T11116
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03030
DNA replication
slaf03410
Base excision repair
slaf03420
Nucleotide excision repair
slaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
141644065
03410 Base excision repair
141644065
03420 Nucleotide excision repair
141644065
03430 Mismatch repair
141644065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slaf03032
]
141644065
03400 DNA repair and recombination proteins [BR:
slaf03400
]
141644065
DNA replication proteins [BR:
slaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
141644065
DNA repair and recombination proteins [BR:
slaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
141644065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
RCF1-5-like_lid
PTCB-BRCT
AAA_30
Rad17
AAA_22
AAA_19
nSTAND3
Gp44_lid
AAA_assoc_2
BRCT_2
Zeta_toxin
AAA_24
RuvB_N
AAA_5
Sigma54_activ_2
AAA_18
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
141644065
NCBI-ProteinID:
XP_074309589
LinkDB
All DBs
Position
2:complement(192137135..192148288)
Genome browser
AA seq
979 aa
AA seq
DB search
MSDIRKWFMKQHDKNNGNAAAAKPVASKPSSEKPAALQVDKADVKQGEQETARRKTSKYF
EKNQEKAKVETEKAQTPAKRKVHIVEEDDDDDDFAPISTRKKSVDASPSKKSVDASPSKK
SIDATPSKKLKGSSGRGIPQKKVEVKEPDEEVNDEENETPVKSAGRGRGGRAASTPSAGG
RGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIK
RHGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKELGTRFLTEDGLFEMIRKSKKSKPSGQD
NSRKAPENTPTPTKKTSQNVEVKKDDGGSSATKSMVVKPAAGPSPAKRKNLSKEGASLTW
TEKYRPKVPNDIVGNQVLVKRLHDWLSHWDEQFLANNKGKGKKKNDSTEKKAVLMSGNPG
IGKTTSAKLVSKMLGYEAIEVNASDSRGKANSKIDKGIGGSTANSIKELISNEALGANMD
RSKHPKTVLIMDEVDGMSAGDRGGIADLIASIKVSKIPIICICNDRYSQKLKSLTNYCEQ
YNYRKPTKQQMAKRLLQIAKAEGLQVNEIALEELAERCNGDIRMAINQLQYMSLSMSVIK
YDDIRKRLVSNAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDLDLVPLLIQENYIN
FRPSSLGKDDSGMKRMNSLARAAESIADGDIINVQIRRYRQWQLSQSGSVCSCIIPAALM
HGQRETFTQGERNFNRFGGWLGKNSTMGKNRRILEDLHVHMLASSGSYIGRGTLRLDFLT
LLSKQLTEPLRALPKEEAVKNVVEFMDNYSLSMDDYETLMELSKFQGHASPTDGILPAVK
AALTKAYKEGSRSRVVRTSDLITLPGFKKAPKKRSAALESVDELNEADGDVDVVNEEEND
EEAEESEDADGNANQLKLDLESYNAKGIQVQVDLKGGAGSSGTKKTQKAPAGRGKGGASE
PASGKRGGRGSGSAAKRKR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattaggaaatggtttatgaagcagcatgacaagaataatggcaatgctgct
gctgccaagccggtggccagtaagccctcatccgaaaaacccgctgctttgcaagtcgat
aaagcggatgtaaaacagggagaacaagaaacggctagaagaaaaacgagcaagtatttt
gagaaaaatcaagagaaggcgaaagttgagacggaaaaggcgcagactcctgccaaaagg
aaggttcacattgtagaggaggatgacgatgatgatgactttgctcctattagtactaga
aaaaaatcagttgatgctagtcccagtaagaaatcagttgatgctagtcctagtaagaaa
tcaattgatgctactcctagtaagaagttaaagggcagttcaggaagaggtattccacag
aaaaaggtggaagttaaagagcctgatgaggaagttaatgatgaggagaatgaaactcct
gtcaagtctgctggaaggggtcgtggagggagagctgcatcaaccccttctgctggtggg
agaggacgtggaggtggtggacgtggtgggttcatgaactttggtgaaaggaaagatcca
ccccataagggggaaaaggaagttcctgaaggagcccctgattgtttagctggattgacc
tttgtgatttctggaacacttgacagtttggagagggaagaagcagaagatttgatcaag
cgtcatggaggccgtgttactggatctgtcagcaagaaaacgaattatcttttgtgtgat
gaagacattggagggcggaagtctgaaaaagccaaggaactgggaacacgctttttaaca
gaagatggattgtttgaaatgatccggaaaagcaaaaagtccaaaccatctggtcaagac
aactctagaaaagctcctgaaaacactcccactcctactaagaaaacatcgcagaatgtg
gaagtgaaaaaagatgatggaggaagctctgcaactaaaagtatggttgttaaacctgct
gctggtccttctcctgcaaagcgaaaaaatttgtcaaaggaaggagcttccttgacatgg
acagaaaagtatagaccaaaagttccaaacgacatagtgggcaatcaagtgcttgttaaa
cgcctgcatgattggttgtcacattgggatgagcaatttcttgctaacaataaaggaaag
gggaaaaagaaaaatgattctactgagaaaaaggctgtgttaatgagtggaaatcctggt
atagggaaaacaacatctgcgaagctagttagtaaaatgcttggctatgaggcaattgag
gttaatgccagtgatagtcgtggaaaggctaattccaaaattgataaaggaattggtgga
agcacggcaaattccataaaagagcttattagtaatgaggcacttggtgccaatatggat
aggtcaaagcaccctaagactgttctgattatggatgaggttgatggcatgtctgcgggt
gatagaggtggtattgcggacctgattgctagcatcaaggtctccaagattccaattatc
tgcatctgtaatgaccgctatagtcagaaattgaaaagccttaccaactactgtgaacag
tataactaccgaaagcccacaaaacagcagatggccaagaggttgttgcagattgcaaaa
gctgaagggcttcaagttaacgagattgctttggaagagcttgcagagcgatgtaatgga
gatattcgcatggccataaaccagctgcagtatatgagtctatccatgtcagttattaaa
tatgatgatattagaaagcgacttgttagcaatgcgaaggacgaagatatctctccgttt
acagctgtggacaagttgttcggctttaatggtggaaagttgaggatggatgaaagaata
gacttgagtatgagcgatcttgatctggttccccttctgatccaggaaaattatattaac
tttcgacccagctctttggggaaggatgatagtggaatgaaaagaatgaactctcttgca
cgtgctgctgaatcaattgctgatggagatattattaatgttcaaataagaagataccga
cagtggcagctctctcaaagtggctctgtttgttcttgcattataccggcagcgttgatg
catggacagagggagacatttactcagggtgaaaggaattttaacagatttggaggttgg
cttggaaagaactcaacaatgggaaagaaccgaagaatcttagaggatctacacgtgcat
atgctggcatctagtggctcgtatattgggagggggactttaagacttgacttccttaca
cttctttctaaacaattaaccgaaccacttcgagctcttcccaaggaggaagctgttaaa
aacgttgtcgagtttatggacaattactcgttaagtatggatgactatgagacgcttatg
gagctatcaaaatttcaggggcatgcaagtccgacagatggtatattgccagctgtaaaa
gctgcacttacaaaagcatataaagaaggtagtaggtcccgtgttgtacgaacatcagat
ttgatcaccctcccaggctttaaaaaagcccccaagaagagatctgctgcccttgagtct
gttgatgaattgaatgaggcagatggtgatgttgatgtagtaaacgaggaagagaacgat
gaagaagcagaggaatcagaagatgcagatggtaacgcaaatcagctgaagctggatctt
gaaagctataacgctaaagggattcaagtgcaagtagacttgaaaggtggtgctggaagt
tccggcaccaagaagacccagaaggcgccagcaggtcgaggcaaggggggcgcttctgag
ccagcctcaggcaagagaggtggaagaggttcagggagtgcggccaaaagaaagagatga
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