Silene latifolia (white campion): 141644294
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Entry
141644294 CDS
T11116
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf00040
Pentose and glucuronate interconversions
slaf01100
Metabolic pathways
Module
slaf_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
141644294
Enzymes [BR:
slaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
141644294
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
141644294
NCBI-ProteinID:
XP_074309890
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Position
2:197117311..197121138
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AA seq
475 aa
AA seq
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MKSGKWFSIIYLGIILTTLHIAFSVISTEARKNYAISHNKHTKHKHGKGKPSHSCKSPPI
PPPPSSDSSPAISGSFNVLSFGAKGDGATDDSKAFLRTWQAACKVTGATVEVPSGYSFFI
KPISLLGPCMPQLALQIDGTLLAPPEVSSWAKSDLFQWINIKWVQNFTIQGSGVVNGQGS
KWWSSSQSTADKKNSPSTHVPSMKPTALRFYASNNVIVRDITIKNSPLCHLKFDNSIGVE
VINVTISSPEDSPNTDGIHLQNTKDVEIHDSNIGCGDDCVSIQTGCSNIHLHHINCGPGH
GISLGGLGKDKSIACASDIVVEDIFMQSTLYGVRIKTWPGGIGSVKNVTFSNIQVSDVKV
PLIIDQFYCENNVHCKNQSGAVAISNIKYNTIVGTYSAQPIHLACSTDVPCVDVDLVDIQ
LKPSPVNHGLQQALCYNSYGTTKAPLVPASIDYCLRDSGRFAKIAKLSHDHTVCQ
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtggcaagtggttttccattatttatctagggataatcctaacaactcttcat
atcgcattttctgttatctcgacagaggctcggaagaactatgccataagtcataataaa
catacaaaacataaacacgggaaaggaaaacctagtcattcttgtaaaagtccaccaata
ccacctccaccttcatctgattcttctccagcaatctcaggtagctttaatgtcctctct
ttcggagcaaaaggcgacggtgccactgatgattctaaggcatttttacgaacatggcaa
gctgcatgcaaagtaacaggagcaactgtggaagttccttcaggatacagtttcttcatt
aagcctataagcctcttaggaccttgcatgccgcagcttgctctgcagatagatggaaca
ttgttagcacctccagaagtaagttcatgggcaaaatctgatctatttcaatggattaat
atcaaatgggtccaaaactttaccatccaaggcagcggagtggttaacggtcagggctct
aagtggtggtcttcctcgcagtccacggcagataagaagaattctccatcaactcatgtt
ccaagcatgaaacctacagcattgagattttacgctagcaacaatgtaatagttcgtgat
attacgatcaaaaacagtccactttgccatctgaaatttgataattccataggagtagag
gtcatcaatgtcaccatttcgtcaccagaagatagccctaacactgatggtattcatctt
caaaacactaaagatgttgaaatccatgattctaacattggatgtggagatgactgtgta
tccattcaaactggttgctctaacattcatttgcaccatattaattgcggtcctggccat
ggaattagtttgggaggactagggaaggataaaagtatcgcgtgtgcatctgatattgtc
gtcgaagatatcttcatgcaaagtacactatatggagtgaggatcaagacatggccgggt
ggtatcggatctgttaaaaacgtgacattctcaaatatacaagtttcagacgtcaaggtt
cctctaataatcgaccaattctattgcgagaataatgttcattgcaagaaccaaagtggc
gcagtggcaatatccaacatcaaatacaatacaatagttgggacttattctgcacaacca
attcatctagcttgtagcactgatgtcccttgtgtcgacgttgatcttgtcgacattcaa
ttgaagccatctccagtcaaccacggacttcagcaagcgttatgttacaattcttatggc
acaacaaaagctcctttggttccggctagtatagactattgtctacgagatagtggtaga
tttgcgaagatagcgaaattgtcccatgatcatactgtatgccaataa
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