Silene latifolia (white campion): 141646228
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Entry
141646228 CDS
T11116
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141646228
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slaf01009
]
141646228
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slaf03041
]
141646228
Protein phosphatases and associated proteins [BR:
slaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141646228
Spliceosome [BR:
slaf03041
]
Common components
Common spliceosomal components
SR proteins
141646228
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
141646228
NCBI-ProteinID:
XP_074310297
LinkDB
All DBs
Position
3:complement(114277317..114280559)
Genome browser
AA seq
133 aa
AA seq
DB search
MSHSRDESRSPSPDVSASPGTTCHRPRSRSRSKSLPRRSRSRSVDVSNPGNNLYMTGLSM
RVTSDDLEKFFSKEGKVLECNLVKDPHTKESRGFAFITMETVEGAERYLKNLNRSVLEGR
LITVEKQIELGYG
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattcaagggatgaaagtaggtcaccttcaccagatgtgtctgcctccccaggc
actacctgtcaccgacctcggtctaggtctaggtcaaagtcattgccgagacgcagtcgt
tctaggagtgttgatgtttcgaatcccggaaataacttatatatgactggtttgtcgatg
agggttaccagcgatgatcttgagaagttctttagcaaggaggggaaggtccttgaatgc
aatttagttaaggatcctcatacaaaagaatctcgtggctttgctttcatcactatggag
actgttgaaggagcggaaagatatctgaagaatctgaatcgctctgttcttgaaggccga
ctaatcacagtggagaagcagatagaattgggatatggatga
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integrated database retrieval system
