Silene latifolia (white campion): 141646369
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Entry
141646369 CDS
T11116
Name
(RefSeq) uncharacterized protein LOC141646369
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
slaf Silene latifolia (white campion)
Pathway
slaf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141646369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141646369
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
141646369
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
WHD_UBR1
DUF7863
Motif
Other DBs
NCBI-GeneID:
141646369
NCBI-ProteinID:
XP_074310382
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All DBs
Position
3:142953685..142986567
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AA seq
262 aa
AA seq
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MEESNNNNKNNNIVDTSYADRVVFLMKCPALVSRSFQSTSSLSSSSSSSSINNNNNVVPV
AKLVLSLDALCPADDDNTQFTMELTGTDLGNVPKFYSMDMSKDFAPMSVFSESQGKIYVE
GKIKTKFDVRPQYDGIERYGKLCRERTNKYSTKTRQIQVIGHDKPIMNMPGIIHVQEKKK
VVAKGSEAKRTRRDRGEMEDITFKLFEQQSNWTLKELVNKTDQPEQFMKDILKDLCVYNN
KGVNQGTYQLKPEYKKSIDDPN
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatccaacaacaataacaagaataataacattgtggacacttcatatgctgac
agagttgtatttttgatgaagtgccctgccctcgtttcccgttcttttcaatctacatct
tcattatcatcttcttcttcttcttcttcgattaataataacaacaatgttgttccggtt
gcaaaacttgtgctttctcttgacgctctttgccccgctgacgacgataacactcagttc
accatggaattgactggcactgatctaggaaatgtaccaaagttttactccatggatatg
tcaaaagattttgctccaatgtctgtcttttctgaatctcaaggtaagatttatgtggaa
ggcaagataaagaccaaatttgacgtgaggcctcagtatgatggtattgagagatatggg
aaactatgtcgtgaacgtactaacaaatattcaacgaagactagacaaattcaggtgatt
ggtcatgataagcccataatgaatatgccgggaattattcacgttcaggagaaaaagaaa
gtggttgctaagggatcagaagcaaaaaggacaaggagggatcgtggagagatggaagat
attacattcaaactttttgaacaacaatccaactggactctcaaagagcttgttaataag
actgaccaaccagagcaattcatgaaagatatactgaaagacctttgtgtgtacaacaac
aaaggagtgaatcaagggacctatcagctaaaacccgaatacaagaaatctattgatgat
ccaaactaa
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