Silene latifolia (white campion): 141646620
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Entry
141646620 CDS
T11116
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
slaf Silene latifolia (white campion)
Brite
KEGG Orthology (KO) [BR:
slaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slaf03021
]
141646620
03036 Chromosome and associated proteins [BR:
slaf03036
]
141646620
Transcription machinery [BR:
slaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
141646620
Chromosome and associated proteins [BR:
slaf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
141646620
SLIK complex
141646620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
SLIDE
Chromo_MIT1
KH_PARP14_5
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
141646620
NCBI-ProteinID:
XP_074310601
LinkDB
All DBs
Position
3:719430..735583
Genome browser
AA seq
1706 aa
AA seq
DB search
MAFFRDYSSETTNHREMEDKNVGHTVNRAHSPIDIDLNSSDNDFEMKMDGQYQNYGDPDN
NRLSNDVAVNDGLDMLPSTSHTYERRTGGVGKWGSTFLQGNQRPESRNISHSEHESRSGS
EYINDEGSDGVEDYEVQKDMEKIPAEEMLSDEYYEQDGDDQNDSLQYRNSKPTTFSSRPQ
SRIPMTTKLISRSRKRAYDDDDVYAEEDDEEDEDVADGDDPADADFDPEYGDIDGPATNK
DGDWEVEESDEDVESEGEPENSDDDDDDSYFKKKPRGGLRGRSGRNANACKKPLVVPARR
RKSRVSEDEFSALDSDADSDEGFRARRKSHLSKSSKESRKNETRTSSRSIRKVSYVESDD
GEEADEEKNKKAHKEEFEEEDADAIERVLWHQPRGMAEEAMRNNKSTEPVLLSHLFDTEP
DWNEMEFLIKWKGQSHLHCQWKSLIELQNLSGFKKVLNYMKRVKEDVRFRMSVSREEIEV
HDVSKEMDLDLFKQNCQVERIIAHRISKDSFDDAISEYLVKWQGLSYAEATWEKEVVIES
ARDAINEYKAREAALAVQGKTVDAQRRKSRGSLRKLDEQPEWLRGGKLRDYQLEGLNFLV
ISWRNDTNVILADEMGLGKTVQSVSMLGFLQNSQQIYGPFLVVVPLSTLSNWAKEFRKWL
PNMNVIVYVGTRGSREVCQQYEFYNDKSTGRAIKFDALLTTYEVVLKDKAVLSKIKWNYL
MVDEAHRLKNSEASLYTALSEFSTKNKVLITGTPLQNSVEELWALLHFLDPDKFSNKDVF
VQNYKNLSSFNETELSNLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKW
ILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGEFNDGSKLERTILS
SGKLVILDKLLMRLHETKHRVLIFSQMVRMLDILAEYLSLRGFQYQRLDGSTKAELRHQA
MEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV
VNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGKLEKKEAKKGVGFDKNELSAIL
RFGAEELFKEEKNEEESKRRLLSMDIDEILERAEKVEDKEAETDQGNELLSQFKVANFCN
AEDDASFWSRWIKPGSITHAEDALAPRGARFNKSYVEPMQADGTNKRKKRDSPLLKVNAK
RRRGESVHLVPMIDGACAQVRDWSCGNLSKRDATRFAKAVMKFGIASQISSIAAEVGGAI
EGAPVEGQIELYDALIEGCQEAVKGEAIDPKGPLLDFFGVPVKANDMISRVEELQHLAKR
ISRCEDPISQFRVKYLKQSNWSKGCGWNQIDDARLLLGVYYHGFGNWEKIRLDESLGLTK
KIAPVELQTHETFLPRAPNLKDRASALLEMETFADAGKKSNAKARNKSSKHPDHFQNQPK
PRGRGRVGRSNSPKLATRAGNNRSRRNQNAEPLVKEEGEMSGNEEVSKQFKEVKWMEWCQ
DIMADEKKTFERLQKLQTTSADLPKEKVLSKIRKYLQHIGRRIDQIVDEHGQEPHKQDRM
MTRLWKHVSTFSNLTGDRLYQIYSKLKQEQEEEAGVGPSHLNGSNELQRQSTRLKGQKNN
NSYQTAEPDFKIHDPAKFEAWKRRKRAETDAFLEAQGPFQRPVNSAPRLPPSKEMGILGA
APSDSKPFKIRQGAPQPRQGFSSSIR
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggcattttttagggattattcaagtgaaacgacgaatcatagagaaatggaggataag
aatgttggtcataccgtgaatagagcacatagtccgatagatatagacttgaattcaagt
gacaatgattttgagatgaagatggatgggcaatatcaaaactatggagacccggataat
aacaggttgtctaatgatgtggcggttaatgatggtcttgatatgttgccttcgacatcc
catacgtatgagagaagaactggaggtgtgggtaaatgggggtctactttccttcaaggc
aatcaacgtccggagtctcgtaacatttctcattccgaacatgaatccagaagtggttct
gaatatattaatgatgaagggtctgacggtgttgaggactatgaggttcagaaggatatg
gaaaagattcccgcggaggagatgttgtctgatgagtattacgagcaagacggggatgat
cagaatgattcgttgcaatacaggaactcgaagcctactacgtttagttcacgaccccag
tcgaggatccctatgactactaagctaatttcaagaagtcggaagagagcctatgatgat
gatgatgtttatgcagaggaggacgacgaggaagatgaggatgtagcagatggagatgat
cctgctgatgcagactttgatcctgaatacggagacattgatgggcctgcgacgaataag
gatggagactgggaagttgaagagtctgacgaagatgttgaaagtgaaggggaacctgag
aattcagatgacgacgatgatgactcatactttaagaaaaagcctaggggtggactgcga
ggtaggagtggacgtaatgctaatgcttgtaagaagccactggttgtgcctgcaagaaga
agaaaaagtagggtttcagaggatgaattttccgctctggactcagatgctgatagcgat
gaaggttttagggcgaggaggaaatcccatctttctaaaagcagcaaggagagcaggaaa
aatgagactcgcacatcaagtaggtcaatcaggaaggtatcatatgttgaaagtgacgat
ggtgaagaggctgatgaagagaaaaataaaaaggcccacaaggaggagtttgaagaagaa
gacgcagatgctattgaaagagtcttgtggcatcagccaagaggaatggctgaggaagcc
atgaggaataataaatcaactgagcctgtactgttaagccatttgtttgacactgaacct
gattggaatgaaatggaatttttgattaaatggaaaggccaatctcatctacattgtcag
tggaaatcactgatagagttacaaaatctcagtggtttcaagaaggttctgaattacatg
aaaagggttaaggaagatgtaaggtttcgaatgtcagtatcccgtgaggagatagaagtt
catgatgtaagcaaggaaatggatttggatctgttcaaacaaaattgtcaggttgagaga
attattgcacataggatcagcaaagatagttttgatgatgctatatctgaatatttagtg
aagtggcaaggattatcttatgctgaagccacctgggagaaagaggtggttattgaatct
gcgagagatgctattaatgaatacaaggctcgtgaggctgctttggcagtgcaggggaaa
acagtggatgcccagaggagaaagagtagaggaagtttgcggaagctggatgagcagcct
gaatggctgagaggaggaaagcttcgtgattatcagcttgagggcttaaatttccttgtt
attagttggagaaatgacactaatgtcatccttgctgatgagatgggtcttggaaaaact
gttcaatcagtctctatgcttggttttttacagaatagtcaacaaatctatggcccattc
cttgtggttgtaccattatcgactctgtccaattgggcaaaagaatttcggaaatggctt
ccaaatatgaatgtcattgtgtatgttggtacgcgagggagcagagaggtctgccagcag
tatgagttttacaatgacaagagtactggcagagcgattaagtttgatgcattgctgacg
acatatgaagttgtcctaaaggataaggccgtgttgtctaagattaagtggaactacctc
atggttgatgaagctcaccggctaaagaatagtgaagcttcgttatatactgctctctca
gaatttagcaccaagaacaaggtacttattacaggcactccattacaaaacagcgtggag
gagctatgggctctactgcacttcctagatcctgacaagttcagcaataaagatgttttt
gtccaaaactataagaatctgagctcatttaatgagactgagctttcaaaccttcacatg
gagttgagacctcatatcctccggagagttattaaagatgtggagaaatcattgccaccg
aaaattgagcgtatcctaagggttgaaatgtccccactccagaaacagtattacaagtgg
atcttggaacgcaactttcatgacttgaacaaaggggttcgtggaaatcaggtttcacta
ttgaacatcgtggtggagttgaagaagtgctgcaatcatccattcttatttgaaagtgca
gatcatggttatgggggtgaatttaacgatggaagtaaacttgagcgcaccattttaagt
agtggaaagcttgttatacttgataaactacttatgagattgcatgagacaaagcatcgc
gttcttatattttctcagatggtaagaatgttggacatattagcagagtatttgtcactc
agagggttccagtatcagagacttgatggtagtacgaaggctgagttgcgacatcaggct
atggaacatttcaatgctccaggaagtgacgatttctgctttcttctctctactcgtgct
ggtggactgggcattaatcttgcaactgcagacacagttattatatttgattctgactgg
aacccacaaaacgacctacaggcaatgagtagagctcacagaattggacagcaagaagtt
gttaatatctaccgttttgtaactagtaaaagtgttgaagaagacatacttgaaagggca
aagaagaaaatggtccttgatcatctggttattcagaagttgaatgcagaaggtaaactg
gagaagaaagaggctaagaagggtgttgggtttgacaaaaatgagctttcagcaattttg
aggtttggggcggaagaactattcaaggaagagaaaaatgaggaggaaagcaaaaggaga
cttttaagcatggatattgatgaaattttagagagagcagagaaggtggaggacaaggag
gctgagactgatcaaggaaatgagcttctcagtcaattcaaggttgcgaatttttgcaat
gccgaagatgacgcgagtttctggagccgttggataaagcccggatctattacacatgcg
gaggatgcattagctcctagaggagcgagatttaacaagagttatgtggagcctatgcaa
gctgatgggaccaacaaaaggaaaaagagagattcacctttactaaaggtaaatgcaaaa
cgacgtcgcggtgagtctgtgcatttggtcccgatgattgatggagcttgtgctcaagta
agagattggtcatgtgggaatctatcaaaacgagatgcaacccgctttgcaaaagctgtt
atgaagttcggaattgcaagccaaataagttctattgcagctgaggttgggggcgctatt
gagggcgctcccgttgaaggtcaaattgaactttatgatgctttaattgagggatgtcaa
gaggctgttaaaggcgaagcaattgatccaaagggacctttgttggatttttttggtgtt
cctgttaaagcaaatgatatgattagtcgcgttgaagaacttcagcacttagctaagcgg
atcagtcggtgtgaagatcccatatcacagttccgagtgaaatacctgaaacagtctaat
tggtcaaaaggctgtggctggaatcaaattgatgatgcaagattgctcttgggggtgtat
tatcatggatttggcaattgggaaaaaattcggttggatgaaagcctcggtttgactaag
aagattgccccagtggagcttcaaacacatgaaacttttcttccacgtgcccctaacctg
aaggatcgtgcctcggcacttcttgaaatggaaacctttgcagatgccggaaagaagtct
aacgccaaagcacgcaataaatcctcgaagcatcctgatcattttcagaatcaacccaag
cctcgtggtaggggccgcgtaggaagatcaaattccccaaaacttgcgactagagcgggc
aacaacaggtctcggaggaaccagaatgctgaacctttagttaaagaggaaggtgagatg
tcaggtaatgaagaagtgtctaagcaattcaaggaagtgaaatggatggaatggtgtcaa
gatatcatggctgatgagaaaaaaacttttgaacgtctccagaaattgcagaccacaagt
gcggaccttcctaaggagaaggtactatctaagattcgaaagtacctgcaacatattggt
cgaaggatcgatcagattgtcgatgaacatgggcaagaaccacataagcaagaccgaatg
atgacgcgattatggaagcatgtctcaaccttttctaatttgacgggagacaggttgtat
caaatctattccaaacttaagcaggaacaagaagaagaagctggtgtgggaccctctcat
ttaaacggaagcaacgagttgcagcgtcaatccacaaggttaaaagggcaaaaaaacaat
aactcgtatcaaactgctgaaccagattttaaaatccatgatccagcaaagtttgaagca
tggaaacgaaggaaaagagccgagactgatgctttcttagaagctcaaggcccgttccag
aggcccgtgaatagcgccccaaggttacctccttccaaggaaatgggcatcttgggtgct
gcaccctctgatagtaaaccattcaagatccgtcagggtgctccccagccgaggcaaggt
ttctcatctagcataaggtag
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integrated database retrieval system
